Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.1□□□□□ -1.75
CLPTM1O96005 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLPTM1O96005 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.1□□□□□ -1.75
CLPTM1O96005 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.1□□□□□ -1.75
CLPTM1O96005 MIR1183-201ENST00000408856 89 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 RN7SKP100-201ENST00000411258 284 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.1□□□□□ -1.75
CLPTM1O96005 RPS3AP37-201ENST00000419176 745 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 KRR1P1-201ENST00000419430 803 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 MTCO2P21-201ENST00000419780 677 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 HIGD1AP12-201ENST00000427832 281 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 USP9YP9-201ENST00000429406 715 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AC005154.2-201ENST00000438110 379 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLPTM1O96005 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.1□□□□□ -1.75
CLPTM1O96005 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.1□□□□□ -1.75
CLPTM1O96005 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.1□□□□□ -1.75
CLPTM1O96005 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.1□□□□□ -1.75
CLPTM1O96005 AC068135.1-201ENST00000446164 246 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AC005002.1-201ENST00000447458 540 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AC079168.2-201ENST00000453977 416 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.1□□□□□ -1.75
CLPTM1O96005 CDC42P1-201ENST00000456658 548 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 RPS5P7-201ENST00000456664 608 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.1□□□□□ -1.75
CLPTM1O96005 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.1□□□□□ -1.75
CLPTM1O96005 AC069499.1-201ENST00000489433 509 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.1□□□□□ -1.75
CLPTM1O96005 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.1□□□□□ -1.75
CLPTM1O96005 AC111193.1-201ENST00000504097 155 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AC093534.1-201ENST00000504977 132 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 BOLA3P3-201ENST00000505182 232 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AC091860.1-201ENST00000505723 432 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.1□□□□□ -1.75
CLPTM1O96005 PRELID3BP4-201ENST00000515476 571 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 RNU1-6P-201ENST00000516290 144 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.1□□□□□ -1.75
CLPTM1O96005 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.1□□□□□ -1.75
CLPTM1O96005 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.1□□□□□ -1.75
CLPTM1O96005 OR4U1P-201ENST00000554958 912 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.1□□□□□ -1.75
CLPTM1O96005 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.1□□□□□ -1.75
CLPTM1O96005 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.1□□□□□ -1.75
CLPTM1O96005 MTCO1P40-201ENST00000574371 625 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 MIR4270-201ENST00000581799 70 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
CLPTM1O96005 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.1□□□□□ -1.75
CLPTM1O96005 AC125494.3-201ENST00000602759 455 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 MTND3P19-201ENST00000603825 345 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AC002487.1-201ENST00000604565 994 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AL160290.3-201ENST00000604869 165 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CLPTM1O96005 STMN1P1-201ENST00000617809 440 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AC010975.3-201ENST00000618727 978 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 MIR6853-201ENST00000619642 74 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AC024595.1-201ENST00000623088 387 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 AP003497.2-201ENST00000624220 967 ntBASIC4.1□□□□□ -1.75
CLPTM1O96005 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.1□□□□□ -1.75
CLPTM1O96005 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CLPTM1O96005 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.1□□□□□ -1.75
CLPTM1O96005 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CLPTM1O96005 AL442639.1-201ENST00000625030 1899 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.09□□□□□ -1.75
CLPTM1O96005 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLPTM1O96005 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLPTM1O96005 RNU4-68P-201ENST00000364314 141 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLPTM1O96005 SNORA3C-201ENST00000408792 125 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.09□□□□□ -1.75
CLPTM1O96005 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.09□□□□□ -1.75
CLPTM1O96005 HMGB1P45-201ENST00000435986 653 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.09□□□□□ -1.75
CLPTM1O96005 RPL36AP15-201ENST00000444514 266 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.09□□□□□ -1.75
CLPTM1O96005 AC004022.1-201ENST00000447766 1066 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 AC005410.1-202ENST00000460347 485 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.09□□□□□ -1.75
CLPTM1O96005 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.09□□□□□ -1.75
CLPTM1O96005 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.09□□□□□ -1.75
CLPTM1O96005 AC008565.1-201ENST00000509046 885 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 NARSP2-201ENST00000518524 679 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.09□□□□□ -1.75
CLPTM1O96005 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.09□□□□□ -1.75
CLPTM1O96005 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.09□□□□□ -1.75
CLPTM1O96005 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.09□□□□□ -1.75
CLPTM1O96005 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.09□□□□□ -1.75
CLPTM1O96005 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.09□□□□□ -1.75
CLPTM1O96005 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.09□□□□□ -1.75
CLPTM1O96005 AL161713.1-201ENST00000555538 145 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 AC023813.2-201ENST00000564321 469 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.09□□□□□ -1.75
CLPTM1O96005 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.09□□□□□ -1.75
CLPTM1O96005 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.09□□□□□ -1.75
CLPTM1O96005 ZNF92P3-201ENST00000596594 954 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.09□□□□□ -1.75
CLPTM1O96005 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.09□□□□□ -1.75
CLPTM1O96005 MIR486-1-201ENST00000612171 68 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 AC123768.4-201ENST00000616244 701 ntBASIC4.09□□□□□ -1.75
CLPTM1O96005 AP000484.1-201ENST00000620067 1252 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms