Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RAPGEF3O95398 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RAPGEF3O95398 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 VPS35P1-201ENST00000563400 1518 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RAPGEF3O95398 RNU6-1339P-201ENST00000363574 91 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
RAPGEF3O95398 MIR634-201ENST00000385208 97 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 ATP5F1P4-201ENST00000397288 746 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 UBE2Q2P12-201ENST00000414573 204 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 CKS1BP6-201ENST00000424932 240 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 AL365396.1-201ENST00000430854 671 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 CDY14P-201ENST00000431260 1014 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 CDY12P-201ENST00000440679 1015 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 CYCSP24-201ENST00000445119 316 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 CDY13P-201ENST00000445813 1015 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 AC005002.1-201ENST00000447458 540 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 CDY23P-201ENST00000451661 1014 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 RPL23AP81-201ENST00000455252 467 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 AC037198.2-201ENST00000478845 733 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 AF213884.1-201ENST00000488102 463 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 MRPS33P3-201ENST00000513456 322 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 RNU1-95P-201ENST00000516357 160 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 RNU1-128P-201ENST00000516704 160 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 AL356057.1-201ENST00000533798 831 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 AP000255.1-201ENST00000610276 676 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 AC015967.1-201ENST00000619893 476 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 AC004943.3-201ENST00000624116 600 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 AL034408.1-202ENST00000636088 415 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 AL513185.3-201ENST00000433335 1300 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RAPGEF3O95398 MAPK10-349ENST00000641767 3661 ntBASIC6.41□□□□□ -1.38
RAPGEF3O95398 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RAPGEF3O95398 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RAPGEF3O95398 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RAPGEF3O95398 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RAPGEF3O95398 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.41□□□□□ -1.38
RAPGEF3O95398 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RAPGEF3O95398 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC6.4□□□□□ -1.38
RAPGEF3O95398 AC093311.1-201ENST00000506586 2021 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RAPGEF3O95398 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
RAPGEF3O95398 AC133552.1-201ENST00000569988 4007 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RAPGEF3O95398 USP9YP4-201ENST00000424401 1745 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 SNORD116.1-201ENST00000365628 92 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.4□□□□□ -1.38
RAPGEF3O95398 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.4□□□□□ -1.38
RAPGEF3O95398 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.4□□□□□ -1.38
RAPGEF3O95398 SYF2P2-201ENST00000417620 583 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 TRGV6-201ENST00000417928 299 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 NPM1P34-201ENST00000428821 893 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.4□□□□□ -1.38
RAPGEF3O95398 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.4□□□□□ -1.38
RAPGEF3O95398 AL929288.2-201ENST00000446368 407 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 PRDX3P3-201ENST00000447765 522 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 RSL24D1P3-201ENST00000449255 495 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 AC104978.1-201ENST00000449387 391 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 ANKRD26P4-201ENST00000455755 950 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.4□□□□□ -1.38
RAPGEF3O95398 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.4□□□□□ -1.38
RAPGEF3O95398 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.4□□□□□ -1.38
RAPGEF3O95398 AP003461.1-201ENST00000528866 78 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.4□□□□□ -1.38
RAPGEF3O95398 POLR2KP1-201ENST00000553226 168 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 AC087465.1-201ENST00000560574 245 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.4□□□□□ -1.38
RAPGEF3O95398 BNIP3P4-201ENST00000604946 565 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 AC018638.7-201ENST00000605836 1114 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 AL592148.2-201ENST00000612210 372 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 AC139792.2-201ENST00000624218 587 ntBASIC6.4□□□□□ -1.38
RAPGEF3O95398 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC6.4□□□□□ -1.38
RAPGEF3O95398 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RAPGEF3O95398 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.4□□□□□ -1.39
RAPGEF3O95398 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
RAPGEF3O95398 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RAPGEF3O95398 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
RAPGEF3O95398 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RAPGEF3O95398 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.39□□□□□ -1.39
RAPGEF3O95398 ARHGAP42P3-201ENST00000443989 2508 ntBASIC6.39□□□□□ -1.39
RAPGEF3O95398 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
RAPGEF3O95398 SNORA5A-201ENST00000384111 134 ntBASIC6.39□□□□□ -1.39
RAPGEF3O95398 RNU6-98P-201ENST00000384173 107 ntBASIC6.39□□□□□ -1.39
RAPGEF3O95398 MIR183-201ENST00000384958 110 ntBASIC6.39□□□□□ -1.39
RAPGEF3O95398 RNU11-201ENST00000387069 134 ntBASIC6.39□□□□□ -1.39
RAPGEF3O95398 Z92545.1-201ENST00000411782 234 ntBASIC6.39□□□□□ -1.39
RAPGEF3O95398 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms