Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SNORA17.1-201ENST00000362945 126 ntBASIC4.88□□□□□ -1.63
PROM1O43490 RNU6-839P-201ENST00000363347 108 ntBASIC4.88□□□□□ -1.63
PROM1O43490 RNU6-660P-201ENST00000364566 109 ntBASIC4.88□□□□□ -1.63
PROM1O43490 MIR217-201ENST00000384817 110 ntBASIC4.88□□□□□ -1.63
PROM1O43490 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PROM1O43490 PIGPP2-201ENST00000411569 458 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.88□□□□□ -1.63
PROM1O43490 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.88□□□□□ -1.63
PROM1O43490 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.88□□□□□ -1.63
PROM1O43490 Z93242.1-201ENST00000427102 353 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AC005033.1-201ENST00000428904 813 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.88□□□□□ -1.63
PROM1O43490 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.88□□□□□ -1.63
PROM1O43490 RPS24P8-201ENST00000431490 402 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.88□□□□□ -1.63
PROM1O43490 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.88□□□□□ -1.63
PROM1O43490 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.88□□□□□ -1.63
PROM1O43490 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 ST13P20-201ENST00000447996 1065 ntBASIC4.88□□□□□ -1.63
PROM1O43490 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.88□□□□□ -1.63
PROM1O43490 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.88□□□□□ -1.63
PROM1O43490 AC009127.1-201ENST00000467090 155 ntBASIC4.88□□□□□ -1.63
PROM1O43490 RPL9P33-201ENST00000484311 566 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AC006499.5-201ENST00000505037 514 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.88□□□□□ -1.63
PROM1O43490 AC048346.1-201ENST00000510247 144 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.88□□□□□ -1.63
PROM1O43490 RN7SKP31-201ENST00000516354 278 ntBASIC4.88□□□□□ -1.63
PROM1O43490 RNU6-405P-201ENST00000516637 110 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.88□□□□□ -1.63
PROM1O43490 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.88□□□□□ -1.63
PROM1O43490 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 AC100784.1-201ENST00000522790 310 ntBASIC4.88□□□□□ -1.63
PROM1O43490 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.88□□□□□ -1.63
PROM1O43490 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 AP001189.2-201ENST00000527320 189 ntBASIC4.88□□□□□ -1.63
PROM1O43490 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.88□□□□□ -1.63
PROM1O43490 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.88□□□□□ -1.63
PROM1O43490 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PROM1O43490 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.88□□□□□ -1.63
PROM1O43490 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.88□□□□□ -1.63
PROM1O43490 OR11J2P-201ENST00000555298 907 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.88□□□□□ -1.63
PROM1O43490 AL133241.1-201ENST00000556832 487 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.88□□□□□ -1.63
PROM1O43490 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.88□□□□□ -1.63
PROM1O43490 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.88□□□□□ -1.63
PROM1O43490 AC090312.2-201ENST00000582687 378 ntBASIC4.88□□□□□ -1.63
PROM1O43490 RN7SL435P-201ENST00000584418 282 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AC087763.1-201ENST00000603391 286 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AC093765.1-201ENST00000603758 881 ntBASIC4.88□□□□□ -1.63
PROM1O43490 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PROM1O43490 AC138749.5-201ENST00000611461 208 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AL355073.2-201ENST00000612106 557 ntBASIC4.88□□□□□ -1.63
PROM1O43490 Z99129.1-201ENST00000612510 255 ntBASIC4.88□□□□□ -1.63
PROM1O43490 MIR7973-1-201ENST00000614683 76 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AC123768.4-201ENST00000616244 701 ntBASIC4.88□□□□□ -1.63
PROM1O43490 AC023509.5-201ENST00000617434 807 ntBASIC4.88□□□□□ -1.63
PROM1O43490 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 AP002505.2-201ENST00000623585 696 ntBASIC4.88□□□□□ -1.63
PROM1O43490 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PROM1O43490 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PROM1O43490 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
PROM1O43490 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PROM1O43490 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PROM1O43490 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.88□□□□□ -1.63
PROM1O43490 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PROM1O43490 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PROM1O43490 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PROM1O43490 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PROM1O43490 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PROM1O43490 AC092447.7-201ENST00000422212 1621 ntBASIC4.87□□□□□ -1.63
PROM1O43490 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PROM1O43490 AC012020.1-201ENST00000624541 1728 ntBASIC4.87□□□□□ -1.63
PROM1O43490 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PROM1O43490 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.87□□□□□ -1.63
PROM1O43490 RNF6P1-201ENST00000444889 1784 ntBASIC4.87□□□□□ -1.63
PROM1O43490 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PROM1O43490 RPL23P2-201ENST00000320371 421 ntBASIC4.87□□□□□ -1.63
PROM1O43490 RNU5F-7P-201ENST00000363696 115 ntBASIC4.87□□□□□ -1.63
PROM1O43490 RN7SKP103-201ENST00000363848 320 ntBASIC4.87□□□□□ -1.63
PROM1O43490 RNU6-374P-201ENST00000364146 108 ntBASIC4.87□□□□□ -1.63
PROM1O43490 SNORA56-201ENST00000383966 129 ntBASIC4.87□□□□□ -1.63
PROM1O43490 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PROM1O43490 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PROM1O43490 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PROM1O43490 CYCSP45-201ENST00000402289 315 ntBASIC4.87□□□□□ -1.63
PROM1O43490 AL589647.1-201ENST00000402485 466 ntBASIC4.87□□□□□ -1.63
PROM1O43490 AL390316.1-201ENST00000406279 553 ntBASIC4.87□□□□□ -1.63
PROM1O43490 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.87□□□□□ -1.63
PROM1O43490 AC073136.2-201ENST00000417282 849 ntBASIC4.87□□□□□ -1.63
PROM1O43490 AL358176.3-201ENST00000420757 454 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms