Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM38O00635 NPM1P33-201ENST00000438918 872 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AC093155.1-201ENST00000440164 826 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AC118469.1-201ENST00000442943 488 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM38O00635 AC073264.2-201ENST00000448886 166 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 IGHV5-78-201ENST00000450948 295 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM38O00635 AC112206.1-201ENST00000468416 477 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AP000893.1-201ENST00000474462 794 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM38O00635 AC104685.1-201ENST00000502445 371 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AC073358.1-201ENST00000505671 684 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM38O00635 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM38O00635 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM38O00635 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM38O00635 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM38O00635 OR5BM1P-201ENST00000512021 366 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM38O00635 RNA5SP249-201ENST00000516127 99 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 RNU6-1225P-201ENST00000516336 65 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM38O00635 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.94□□□□□ -1.62
TRIM38O00635 AP001189.2-201ENST00000527320 189 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AC005832.3-201ENST00000537929 631 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM38O00635 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM38O00635 MIR3667-201ENST00000581025 74 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.94□□□□□ -1.62
TRIM38O00635 MTATP6P3-201ENST00000581686 676 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM38O00635 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM38O00635 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.94□□□□□ -1.62
TRIM38O00635 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM38O00635 AC068790.4-201ENST00000602474 263 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 AL359535.1-201ENST00000612100 1087 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 MIR6780A-201ENST00000615089 68 ntBASIC4.94□□□□□ -1.62
TRIM38O00635 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM38O00635 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.94□□□□□ -1.62
TRIM38O00635 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM38O00635 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TRIM38O00635 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
TRIM38O00635 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM38O00635 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.94□□□□□ -1.62
TRIM38O00635 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TRIM38O00635 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM38O00635 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TRIM38O00635 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM38O00635 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM38O00635 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TRIM38O00635 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM38O00635 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
TRIM38O00635 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM38O00635 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM38O00635 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM38O00635 RN7SKP224-201ENST00000364140 325 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM38O00635 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM38O00635 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM38O00635 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM38O00635 DSTNP4-201ENST00000399472 474 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM38O00635 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM38O00635 NRBF2P2-201ENST00000413087 861 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 AF186996.5-201ENST00000418098 904 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM38O00635 AC004074.1-201ENST00000421810 1063 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 RPL30P3-201ENST00000424262 333 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 OR5BE1P-201ENST00000425977 939 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM38O00635 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM38O00635 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM38O00635 COX7BP2-201ENST00000437976 242 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 AC241584.1-201ENST00000438469 1241 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 RPL23AP76-201ENST00000441860 458 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM38O00635 PTMAP3-201ENST00000447474 330 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 AL513533.1-201ENST00000453728 415 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 RN7SL443P-201ENST00000464331 290 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 RN7SL481P-201ENST00000477764 299 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 RPL23AP72-201ENST00000492447 435 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 KLRA1P-201ENST00000503499 986 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM38O00635 GAPDHP56-201ENST00000506031 988 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM38O00635 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM38O00635 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM38O00635 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM38O00635 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM38O00635 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.93□□□□□ -1.62
TRIM38O00635 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM38O00635 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM38O00635 AC087465.1-201ENST00000560574 245 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 GTF2IP8-201ENST00000560687 584 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.93□□□□□ -1.62
TRIM38O00635 AC091042.1-201ENST00000579213 173 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 TUSC7.1-201ENST00000610969 165 ntBASIC4.93□□□□□ -1.62
TRIM38O00635 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
TRIM38O00635 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms