Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MRPL50P4-201ENST00000446432 475 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AL136380.1-201ENST00000447970 162 ntBASIC6.11□□□□□ -1.43
SOX1O00570 RNU6-261P-201ENST00000459506 102 ntBASIC6.11□□□□□ -1.43
SOX1O00570 RPL7P19-201ENST00000469948 618 ntBASIC6.11□□□□□ -1.43
SOX1O00570 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX1O00570 IGBP1P4-201ENST00000503202 879 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AC026402.1-201ENST00000513642 170 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AC034159.1-201ENST00000513885 583 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX1O00570 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX1O00570 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX1O00570 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX1O00570 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX1O00570 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX1O00570 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.11□□□□□ -1.43
SOX1O00570 AC007151.1-201ENST00000572774 483 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AC099489.2-201ENST00000574976 260 ntBASIC6.11□□□□□ -1.43
SOX1O00570 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.11□□□□□ -1.43
SOX1O00570 AL359704.2-201ENST00000604335 521 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AC009027.1-201ENST00000604510 479 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AC004853.1-201ENST00000604902 698 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AC008966.2-201ENST00000606157 453 ntBASIC6.11□□□□□ -1.43
SOX1O00570 uc_338.5-201ENST00000611839 155 ntBASIC6.11□□□□□ -1.43
SOX1O00570 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX1O00570 AC024255.1-201ENST00000614376 102 ntBASIC6.11□□□□□ -1.43
SOX1O00570 AC005858.4-201ENST00000623191 700 ntBASIC6.11□□□□□ -1.43
SOX1O00570 TPTEP1-208ENST00000636884 213 ntBASIC6.11□□□□□ -1.43
SOX1O00570 MAPK10-323ENST00000641493 3207 ntBASIC6.11□□□□□ -1.43
SOX1O00570 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX1O00570 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX1O00570 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 AC092724.1-201ENST00000624623 3397 ntBASIC6.1□□□□□ -1.43
SOX1O00570 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 SNORA69-201ENST00000383895 132 ntBASIC6.1□□□□□ -1.43
SOX1O00570 RPL23AP32-201ENST00000395315 459 ntBASIC6.1□□□□□ -1.43
SOX1O00570 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 HMGB1P17-201ENST00000403495 628 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AC004987.3-201ENST00000413879 771 ntBASIC6.1□□□□□ -1.43
SOX1O00570 NCOR1P3-201ENST00000420479 303 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AL592293.2-201ENST00000422292 996 ntBASIC6.1□□□□□ -1.43
SOX1O00570 OR10T1P-201ENST00000424327 947 ntBASIC6.1□□□□□ -1.43
SOX1O00570 RSL24D1P6-201ENST00000426934 401 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX1O00570 OR2B7P-201ENST00000429302 934 ntBASIC6.1□□□□□ -1.43
SOX1O00570 RPS3AP54-201ENST00000435535 734 ntBASIC6.1□□□□□ -1.43
SOX1O00570 MTND6P18-201ENST00000439477 513 ntBASIC6.1□□□□□ -1.43
SOX1O00570 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 RNU7-136P-201ENST00000458819 69 ntBASIC6.1□□□□□ -1.43
SOX1O00570 RPL23AP12-201ENST00000467573 473 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX1O00570 RN7SL41P-201ENST00000476144 297 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
SOX1O00570 RN7SL447P-201ENST00000494711 245 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.1□□□□□ -1.43
SOX1O00570 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX1O00570 RN7SKP99-201ENST00000517028 307 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX1O00570 AF279873.1-201ENST00000523393 313 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC6.1□□□□□ -1.43
SOX1O00570 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.1□□□□□ -1.43
SOX1O00570 AC092490.3-201ENST00000545370 572 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX1O00570 DPPA3P2-201ENST00000553589 478 ntBASIC6.1□□□□□ -1.43
SOX1O00570 HSPE1P2-201ENST00000554777 306 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AC020661.2-201ENST00000560114 134 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX1O00570 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.1□□□□□ -1.43
SOX1O00570 AC011468.4-201ENST00000603942 409 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AC091193.1-201ENST00000604640 448 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AC093388.1-201ENST00000609166 430 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SOX1O00570 AC099654.6-201ENST00000636487 512 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AC100810.6-201ENST00000638068 285 ntBASIC6.1□□□□□ -1.43
SOX1O00570 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
SOX1O00570 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SOX1O00570 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 ERCC6-202ENST00000374127 1782 ntBASIC6.1□□□□□ -1.43
SOX1O00570 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.1□□□□□ -1.43
SOX1O00570 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SOX1O00570 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SOX1O00570 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 ANKRD62P1-201ENST00000434304 1623 ntBASIC6.1□□□□□ -1.43
SOX1O00570 AC108467.2-201ENST00000617640 1597 ntBASIC6.1□□□□□ -1.43
SOX1O00570 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX1O00570 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SOX1O00570 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX1O00570 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX1O00570 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX1O00570 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX1O00570 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX1O00570 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.09□□□□□ -1.43
SOX1O00570 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms