Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.35□□□□□ -1.71
RGPD3A6NKT7 OR6K4P-201ENST00000423179 955 ntBASIC4.35□□□□□ -1.71
RGPD3A6NKT7 VN1R104P-201ENST00000505115 1009 ntBASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AC008885.1-201ENST00000514930 301 ntBASIC4.35□□□□□ -1.71
RGPD3A6NKT7 IGHV3-63-201ENST00000518422 341 ntBASIC4.35□□□□□ -1.71
RGPD3A6NKT7 MYL12AP1-201ENST00000518490 515 ntBASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AP006245.1-201ENST00000522549 120 ntBASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 AC092868.3-201ENST00000560515 784 ntBASIC4.35□□□□□ -1.71
RGPD3A6NKT7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
RGPD3A6NKT7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RGPD3A6NKT7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RGPD3A6NKT7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.34□□□□□ -1.71
RGPD3A6NKT7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RGPD3A6NKT7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RGPD3A6NKT7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RGPD3A6NKT7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
RGPD3A6NKT7 RNA5SP229-201ENST00000410809 99 ntBASIC4.34□□□□□ -1.71
RGPD3A6NKT7 HMGN1P24-201ENST00000412282 298 ntBASIC4.34□□□□□ -1.71
RGPD3A6NKT7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.34□□□□□ -1.71
RGPD3A6NKT7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.34□□□□□ -1.71
RGPD3A6NKT7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.34□□□□□ -1.71
RGPD3A6NKT7 APOOP4-201ENST00000513530 597 ntBASIC4.34□□□□□ -1.71
RGPD3A6NKT7 KLKP1-201ENST00000595979 403 ntBASIC4.34□□□□□ -1.71
RGPD3A6NKT7 AL139395.1-201ENST00000603662 160 ntBASIC4.34□□□□□ -1.71
RGPD3A6NKT7 AC012603.1-201ENST00000606424 528 ntBASIC4.34□□□□□ -1.71
RGPD3A6NKT7 AC015802.5-201ENST00000607478 399 ntBASIC4.34□□□□□ -1.71
RGPD3A6NKT7 AC105227.2-201ENST00000615075 605 ntBASIC4.34□□□□□ -1.71
RGPD3A6NKT7 SNORD39.4-201ENST00000620099 78 ntBASIC4.34□□□□□ -1.71
RGPD3A6NKT7 AC091905.1-201ENST00000624400 311 ntBASIC4.34□□□□□ -1.71
RGPD3A6NKT7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RGPD3A6NKT7 BTBD10P1-201ENST00000549824 1352 ntBASIC4.34□□□□□ -1.72
RGPD3A6NKT7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.34□□□□□ -1.72
RGPD3A6NKT7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 YWHAEP5-201ENST00000431545 765 ntBASIC4.33□□□□□ -1.72
RGPD3A6NKT7 NDUFB1P1-201ENST00000435191 180 ntBASIC4.33□□□□□ -1.72
RGPD3A6NKT7 SETP5-201ENST00000437270 562 ntBASIC4.33□□□□□ -1.72
RGPD3A6NKT7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 AC023598.1-201ENST00000472521 361 ntBASIC4.33□□□□□ -1.72
RGPD3A6NKT7 HIGD1AP1-201ENST00000550979 275 ntBASIC4.33□□□□□ -1.72
RGPD3A6NKT7 EIF5A2P1-201ENST00000564027 460 ntBASIC4.33□□□□□ -1.72
RGPD3A6NKT7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.33□□□□□ -1.72
RGPD3A6NKT7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 CEP170P1-201ENST00000502249 4587 ntBASIC4.33□□□□□ -1.72
RGPD3A6NKT7 NMD3P1-201ENST00000439704 1488 ntBASIC4.33□□□□□ -1.72
RGPD3A6NKT7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RGPD3A6NKT7 AL359693.1-201ENST00000614959 2407 ntBASIC4.32□□□□□ -1.72
RGPD3A6NKT7 OR5H2-201ENST00000355273 945 ntBASIC4.32□□□□□ -1.72
RGPD3A6NKT7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 AC096638.2-201ENST00000434965 711 ntBASIC4.32□□□□□ -1.72
RGPD3A6NKT7 HMGB3P9-201ENST00000441799 583 ntBASIC4.32□□□□□ -1.72
RGPD3A6NKT7 YWHAQP9-201ENST00000445891 512 ntBASIC4.32□□□□□ -1.72
RGPD3A6NKT7 GTF3AP2-201ENST00000557014 266 ntBASIC4.32□□□□□ -1.72
RGPD3A6NKT7 AC006557.5-201ENST00000603126 811 ntBASIC4.32□□□□□ -1.72
RGPD3A6NKT7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 HSPA8P19-201ENST00000505359 1517 ntBASIC4.32□□□□□ -1.72
RGPD3A6NKT7 AC017007.4-201ENST00000503353 1352 ntBASIC4.32□□□□□ -1.72
RGPD3A6NKT7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 RPL35AP12-201ENST00000425362 338 ntBASIC4.32□□□□□ -1.72
RGPD3A6NKT7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 AP000926.4-201ENST00000527351 454 ntBASIC4.32□□□□□ -1.72
RGPD3A6NKT7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 AL512310.1-201ENST00000548639 172 ntBASIC4.32□□□□□ -1.72
RGPD3A6NKT7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 AC073869.7-201ENST00000640874 297 ntBASIC4.32□□□□□ -1.72
RGPD3A6NKT7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.32□□□□□ -1.72
RGPD3A6NKT7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RGPD3A6NKT7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms