Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 LINC01347-201ENST00000417964 355 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 HIGD1AP4-201ENST00000430194 280 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AL035458.1-201ENST00000433096 585 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC011998.1-201ENST00000433403 117 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 RPS20P32-201ENST00000456044 356 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 snoU13.1-201ENST00000459157 104 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 TRBV8-2-201ENST00000475637 270 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 RPS3AP50-201ENST00000487064 803 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 IGBP1P5-201ENST00000507524 1000 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC111000.3-201ENST00000508057 576 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 OR5AP1P-201ENST00000529730 940 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 HIGD1AP5-201ENST00000529959 259 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AL389895.1-201ENST00000554127 252 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 MIR5684-201ENST00000585074 65 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC011374.2-201ENST00000607135 526 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC019193.2-201ENST00000610012 634 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AL450489.1-201ENST00000612071 468 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC121761.2-201ENST00000617300 689 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 RNU6-156P-201ENST00000621869 107 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AC002044.3-201ENST00000623314 541 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 FAM157B-203ENST00000639350 358 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 AL133383.2-201ENST00000622958 2336 ntBASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RBFOX3A6NFN3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 SNORA60-201ENST00000362396 134 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 SNORD113.2-201ENST00000364166 89 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 RNA5SP505-201ENST00000364748 108 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AL136116.1-201ENST00000403591 381 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 HMGB3P19-201ENST00000403971 560 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 P2RY10P2-201ENST00000416730 913 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 FO393419.3-201ENST00000428741 282 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 CNOT7P1-201ENST00000429006 852 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AL158071.1-201ENST00000430315 461 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 RPL36AP15-201ENST00000444514 266 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AL513533.1-201ENST00000453728 415 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 RPS29P33-201ENST00000456717 146 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 RPS20P4-201ENST00000461659 355 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AC087312.1-201ENST00000471411 480 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AK3P4-201ENST00000504283 583 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AC005921.1-201ENST00000510589 286 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AC008494.2-201ENST00000514544 370 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 RNA5SP519-201ENST00000516480 119 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 SNORA31.13-201ENST00000516624 135 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 IGKV2-23-201ENST00000518729 323 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 MTND2P26-201ENST00000528255 1029 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AP004242.1-201ENST00000533701 349 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 RN7SL690P-201ENST00000582087 240 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AC245128.3-201ENST00000594721 748 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 KLKP1-201ENST00000595979 403 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AC234771.5-201ENST00000600161 514 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 CR589904.2-201ENST00000612533 440 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AC020978.9-201ENST00000624380 1141 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 AC026951.1-201ENST00000559530 2459 ntBASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RBFOX3A6NFN3 RAD17P1-201ENST00000418130 2042 ntBASIC3.03□□□□□ -1.92
RBFOX3A6NFN3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.03□□□□□ -1.92
RBFOX3A6NFN3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RBFOX3A6NFN3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RBFOX3A6NFN3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RBFOX3A6NFN3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RBFOX3A6NFN3 SNORA31-201ENST00000362607 130 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms