Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AP001804.3-201ENST00000525146 880 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC008782.1-201ENST00000603386 430 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC096861.1-201ENST00000616652 240 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 uc_338.34-201ENST00000617467 174 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AP000843.1-201ENST00000624880 701 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC129915.3-201ENST00000634128 948 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 AC023245.2-201ENST00000530760 2978 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 CASC19-246ENST00000641625 1606 ntBASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGA11Q9Y5H2 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 SNORD113-7-201ENST00000363762 77 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AC074375.1-201ENST00000372993 192 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 MIR19A-201ENST00000384878 82 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 RPL7AP14-201ENST00000424041 802 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 OR2AS1P-201ENST00000427827 319 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 NPM1P18-201ENST00000434232 732 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 FTH1P1-201ENST00000437933 532 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 RNU7-180P-201ENST00000459240 63 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 RPL23AP64-201ENST00000469465 435 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 SIAH1P1-201ENST00000479411 923 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AC098591.2-201ENST00000510152 315 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 SCARNA11.1-201ENST00000516918 132 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AC009902.1-201ENST00000519351 183 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 HMGB1P41-201ENST00000520234 440 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 IGHV1-14-201ENST00000523391 241 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 EIF4A2P5-201ENST00000529914 499 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AP000763.2-201ENST00000540641 163 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 MIR4703-201ENST00000577728 79 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 RN7SL208P-201ENST00000577964 296 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 MIR4503-201ENST00000582187 83 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 MIR3149-201ENST00000584629 83 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 MIR3942-201ENST00000585264 109 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AC092807.2-201ENST00000609367 243 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 U1.41-201ENST00000617626 165 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 TCL6_3.1-201ENST00000619064 137 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 AC005514.1-201ENST00000623521 208 ntBASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDHGA11Q9Y5H2 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms