Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.44□□□□□ -1.38
PCDHB11Q9Y5F2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.44□□□□□ -1.38
PCDHB11Q9Y5F2 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.44□□□□□ -1.38
PCDHB11Q9Y5F2 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
PCDHB11Q9Y5F2 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.44□□□□□ -1.38
PCDHB11Q9Y5F2 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.44□□□□□ -1.38
PCDHB11Q9Y5F2 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDHB11Q9Y5F2 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PCDHB11Q9Y5F2 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.44□□□□□ -1.38
PCDHB11Q9Y5F2 AC022905.1-201ENST00000503430 3048 ntBASIC6.44□□□□□ -1.38
PCDHB11Q9Y5F2 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PCDHB11Q9Y5F2 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.44□□□□□ -1.38
PCDHB11Q9Y5F2 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AL591848.4-201ENST00000567832 3472 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 Y_RNA.5-201ENST00000362334 102 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 Y_RNA.212-201ENST00000364177 102 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 RNU6-641P-201ENST00000384006 107 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 Y_RNA.482-201ENST00000384377 111 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 RNU6-1222P-201ENST00000384615 107 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AL139805.1-201ENST00000407837 289 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 RPL7P52-201ENST00000449200 742 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AL583843.1-201ENST00000456070 346 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 SNRPFP3-201ENST00000457792 225 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 MIR2053-201ENST00000459295 91 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 RPL21P6-201ENST00000479171 504 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AC005726.1-201ENST00000494679 427 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 RANP9-201ENST00000519957 271 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AP000763.2-201ENST00000540641 163 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AP003115.1-201ENST00000569849 463 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AL670379.11-201ENST00000604059 253 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AL670379.10-201ENST00000604330 253 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AL683813.2-201ENST00000605245 502 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AL670379.12-201ENST00000605291 253 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AL670379.9-201ENST00000605428 253 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AL589743.6-201ENST00000611025 117 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 uc_338.11-201ENST00000619132 160 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AL596275.2-208ENST00000641192 594 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 AC004158.1-201ENST00000564508 4319 ntBASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
PCDHB11Q9Y5F2 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 ZNF807-201ENST00000328088 1707 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 STAG3L4-201ENST00000352103 530 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 RNU6-1115P-201ENST00000362490 106 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 RNA5SP122-201ENST00000384457 108 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 HMGB3P2-201ENST00000411913 584 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 VDAC1P9-201ENST00000412766 841 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 AL929472.1-201ENST00000417484 429 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 AC018865.2-201ENST00000423631 129 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 SKA2P1-201ENST00000425592 390 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 FABP7P2-201ENST00000429946 379 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 AL160004.2-201ENST00000432935 350 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 AP000936.3-201ENST00000438127 255 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 RPL21P89-201ENST00000444021 467 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 AC104058.1-201ENST00000448028 297 ntBASIC6.42□□□□□ -1.38
PCDHB11Q9Y5F2 YWHAEP1-201ENST00000453697 763 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms