Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL645939.1-201ENST00000453429 797 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 RN7SL542P-201ENST00000467147 294 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AC091959.2-201ENST00000477363 321 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 TPT1P3-201ENST00000492841 512 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AC146944.2-203ENST00000502493 354 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 FTH1P21-201ENST00000512179 511 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 NPM1P41-201ENST00000512920 831 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AC139495.1-202ENST00000513164 354 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 C1DP5-201ENST00000525775 383 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AC063950.1-201ENST00000552036 308 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 NTAN1P1-201ENST00000603150 646 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AL606490.9-201ENST00000603331 271 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AL671309.1-201ENST00000603750 544 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AC245389.1-201ENST00000605141 529 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AC138907.10-201ENST00000623708 983 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AL590396.2-201ENST00000636511 1041 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AC100871.1-201ENST00000507871 1456 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 FAM91A3P-201ENST00000456826 2544 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 MTCO1P18-201ENST00000455518 1419 ntBASIC3.78□□□□□ -1.8
NPIPA1Q9UND3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 MIR448-201ENST00000362131 111 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 RNU6-543P-201ENST00000362576 108 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 RNA5SP27-201ENST00000363839 119 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 ATP5F1P3-201ENST00000397213 657 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 RNU2-65P-201ENST00000410162 185 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 RN7SKP177-201ENST00000410567 355 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 RNU4-6P-201ENST00000410804 122 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 AL121882.1-201ENST00000422893 417 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 AC068135.1-201ENST00000446164 246 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 RAD23BP3-201ENST00000454157 1152 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 AC010469.1-201ENST00000463864 576 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 RN7SL585P-201ENST00000470538 280 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 BNIP3P41-201ENST00000503774 571 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 AC008565.1-201ENST00000509046 885 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 OR8K2P-201ENST00000524645 927 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 MIR4429-201ENST00000580105 73 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 AC099669.2-201ENST00000616549 437 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 AC119744.1-201ENST00000454746 1715 ntBASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.77□□□□□ -1.81
NPIPA1Q9UND3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 RNA5SP52-201ENST00000362448 134 ntBASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 CYCSP19-201ENST00000411715 316 ntBASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 HMGB3P31-201ENST00000413333 595 ntBASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 PRELID3BP11-201ENST00000414230 479 ntBASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 HMGB3P5-201ENST00000428894 612 ntBASIC3.76□□□□□ -1.81
NPIPA1Q9UND3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms