Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AC012065.4-201ENST00000602445 679 ntBASIC4.9□□□□□ -1.63
PACSIN3Q9UKS6 AC005034.5-201ENST00000604219 466 ntBASIC4.9□□□□□ -1.63
PACSIN3Q9UKS6 AC004948.1-201ENST00000609858 672 ntBASIC4.9□□□□□ -1.63
PACSIN3Q9UKS6 AC118658.2-201ENST00000618697 459 ntBASIC4.9□□□□□ -1.63
PACSIN3Q9UKS6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.9□□□□□ -1.63
PACSIN3Q9UKS6 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.9□□□□□ -1.63
PACSIN3Q9UKS6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
PACSIN3Q9UKS6 AC109315.1-201ENST00000584143 1347 ntBASIC4.9□□□□□ -1.63
PACSIN3Q9UKS6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PACSIN3Q9UKS6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PACSIN3Q9UKS6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PACSIN3Q9UKS6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PACSIN3Q9UKS6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 RNU6-374P-201ENST00000364146 108 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 RNU6-171P-201ENST00000384354 107 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 RNU1-77P-201ENST00000390868 162 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 PRUNEP1-201ENST00000425846 705 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 RPL7L1P9-201ENST00000431298 745 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AL512286.1-201ENST00000439244 400 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 GAPDHP25-201ENST00000447061 1001 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC105399.1-202ENST00000447303 205 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 Z99127.3-201ENST00000448158 395 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 RFC5P1-201ENST00000454419 874 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 RN7SL172P-201ENST00000460535 303 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC146507.1-201ENST00000468335 354 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 HMGN1P10-201ENST00000474557 553 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC098583.1-201ENST00000480875 255 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC079841.1-201ENST00000481228 950 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC069439.1-201ENST00000494739 167 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC008628.2-201ENST00000502605 298 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC108941.1-201ENST00000502853 530 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC024558.1-201ENST00000505008 528 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 IGBP1P5-201ENST00000507524 1000 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 HIGD1AP14-201ENST00000507617 282 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 RN7SKP298-201ENST00000515950 94 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 RNA5SP249-201ENST00000516127 99 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 RNA5SP373-201ENST00000517271 95 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 OR4C2P-201ENST00000530855 1064 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC078795.3-201ENST00000602913 472 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AL390816.3-201ENST00000604527 1066 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC000068.2-201ENST00000608816 460 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 CR381653.2-201ENST00000624041 768 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 C4BPAP1-201ENST00000415474 1893 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 MTND5P17-201ENST00000418405 1603 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 PROS2P-201ENST00000474651 1951 ntBASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PACSIN3Q9UKS6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
PACSIN3Q9UKS6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PACSIN3Q9UKS6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PACSIN3Q9UKS6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.88□□□□□ -1.63
PACSIN3Q9UKS6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PACSIN3Q9UKS6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.88□□□□□ -1.63
PACSIN3Q9UKS6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PACSIN3Q9UKS6 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PACSIN3Q9UKS6 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PACSIN3Q9UKS6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PACSIN3Q9UKS6 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PACSIN3Q9UKS6 AC008033.1-201ENST00000216407 1162 ntBASIC4.88□□□□□ -1.63
PACSIN3Q9UKS6 ENSAP3-201ENST00000312710 333 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms