Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 FCF1P3-201ENST00000496394 590 ntBASIC3.42□□□□□ -1.86
CHD7Q9P2D1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 AC106734.1-201ENST00000568646 663 ntBASIC3.42□□□□□ -1.86
CHD7Q9P2D1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 MIR1261-201ENST00000408659 82 ntBASIC3.42□□□□□ -1.86
CHD7Q9P2D1 Z93242.1-201ENST00000427102 353 ntBASIC3.42□□□□□ -1.86
CHD7Q9P2D1 AC093156.1-201ENST00000440382 670 ntBASIC3.42□□□□□ -1.86
CHD7Q9P2D1 RPS4XP13-201ENST00000483219 789 ntBASIC3.42□□□□□ -1.86
CHD7Q9P2D1 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 AL732372.2-225ENST00000642124 456 ntBASIC3.42□□□□□ -1.86
CHD7Q9P2D1 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
CHD7Q9P2D1 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 BMS1P22-201ENST00000414726 313 ntBASIC3.41□□□□□ -1.86
CHD7Q9P2D1 RPL6P21-201ENST00000418672 846 ntBASIC3.41□□□□□ -1.86
CHD7Q9P2D1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 AC087241.4-201ENST00000612441 480 ntBASIC3.41□□□□□ -1.86
CHD7Q9P2D1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 AL078595.2-201ENST00000605309 1780 ntBASIC3.41□□□□□ -1.86
CHD7Q9P2D1 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 RAB28P3-201ENST00000448325 597 ntBASIC3.41□□□□□ -1.86
CHD7Q9P2D1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 RNU4-29P-201ENST00000515943 174 ntBASIC3.41□□□□□ -1.86
CHD7Q9P2D1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 AC087888.1-201ENST00000550884 1254 ntBASIC3.41□□□□□ -1.86
CHD7Q9P2D1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CHD7Q9P2D1 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHD7Q9P2D1 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.4□□□□□ -1.86
CHD7Q9P2D1 SNORA18.3-201ENST00000384122 132 ntBASIC3.4□□□□□ -1.86
CHD7Q9P2D1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.4□□□□□ -1.86
CHD7Q9P2D1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.4□□□□□ -1.86
CHD7Q9P2D1 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.4□□□□□ -1.86
CHD7Q9P2D1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.4□□□□□ -1.86
CHD7Q9P2D1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHD7Q9P2D1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHD7Q9P2D1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHD7Q9P2D1 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CHD7Q9P2D1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.4□□□□□ -1.87
CHD7Q9P2D1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.4□□□□□ -1.87
CHD7Q9P2D1 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
CHD7Q9P2D1 ELOCP8-201ENST00000439309 332 ntBASIC3.4□□□□□ -1.87
CHD7Q9P2D1 ELOCP15-201ENST00000442090 332 ntBASIC3.4□□□□□ -1.87
CHD7Q9P2D1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.4□□□□□ -1.87
CHD7Q9P2D1 AL357552.1-201ENST00000445254 415 ntBASIC3.4□□□□□ -1.87
CHD7Q9P2D1 AC068724.1-201ENST00000487100 792 ntBASIC3.4□□□□□ -1.87
CHD7Q9P2D1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.4□□□□□ -1.87
CHD7Q9P2D1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.4□□□□□ -1.87
CHD7Q9P2D1 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.4□□□□□ -1.87
CHD7Q9P2D1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.4□□□□□ -1.87
CHD7Q9P2D1 AL360157.1-201ENST00000565962 87 ntBASIC3.4□□□□□ -1.87
CHD7Q9P2D1 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.4□□□□□ -1.87
CHD7Q9P2D1 AC079089.3-201ENST00000603094 673 ntBASIC3.4□□□□□ -1.87
CHD7Q9P2D1 AC006363.1-201ENST00000603806 463 ntBASIC3.4□□□□□ -1.87
CHD7Q9P2D1 AL513302.2-201ENST00000562313 1842 ntBASIC3.4□□□□□ -1.87
CHD7Q9P2D1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CHD7Q9P2D1 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CHD7Q9P2D1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHD7Q9P2D1 AC090971.4-201ENST00000560291 1800 ntBASIC3.4□□□□□ -1.87
CHD7Q9P2D1 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CHD7Q9P2D1 RPS21P8-201ENST00000413365 247 ntBASIC3.39□□□□□ -1.87
CHD7Q9P2D1 AL513124.1-201ENST00000450410 614 ntBASIC3.39□□□□□ -1.87
CHD7Q9P2D1 AP000926.4-201ENST00000527351 454 ntBASIC3.39□□□□□ -1.87
CHD7Q9P2D1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.39□□□□□ -1.87
CHD7Q9P2D1 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.39□□□□□ -1.87
CHD7Q9P2D1 AL121576.1-201ENST00000556055 276 ntBASIC3.39□□□□□ -1.87
CHD7Q9P2D1 AL096803.3-201ENST00000609032 532 ntBASIC3.39□□□□□ -1.87
CHD7Q9P2D1 AL157817.1-201ENST00000614264 790 ntBASIC3.39□□□□□ -1.87
CHD7Q9P2D1 AC021755.1-201ENST00000559747 1447 ntBASIC3.39□□□□□ -1.87
CHD7Q9P2D1 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CHD7Q9P2D1 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHD7Q9P2D1 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
CHD7Q9P2D1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHD7Q9P2D1 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CHD7Q9P2D1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHD7Q9P2D1 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CHD7Q9P2D1 AC005005.4-201ENST00000623789 16698 ntBASIC3.39□□□□□ -1.87
CHD7Q9P2D1 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.39□□□□□ -1.87
CHD7Q9P2D1 ATP5HP2-201ENST00000433885 485 ntBASIC3.39□□□□□ -1.87
CHD7Q9P2D1 HLA-N-201ENST00000437516 135 ntBASIC3.39□□□□□ -1.87
CHD7Q9P2D1 TXNP1-201ENST00000441872 371 ntBASIC3.39□□□□□ -1.87
CHD7Q9P2D1 AP002884.2-201ENST00000471647 395 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms