Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL078601.3-201ENST00000573303 535 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 OR10AB1P-201ENST00000609613 938 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AL121612.2-201ENST00000612261 482 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AL122023.1-201ENST00000622847 530 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AC073592.6-201ENST00000624271 415 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 AC020658.2-201ENST00000559030 4020 ntBASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CUEDC1Q9NWM3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AL022323.4-201ENST00000623980 13120 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 RNU6-238P-201ENST00000363313 106 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 Y_RNA.153-201ENST00000363615 91 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 Y_RNA.373-201ENST00000365600 103 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 RNU6-1040P-201ENST00000383974 107 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 FDPSP5-201ENST00000399474 1057 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 PRRC2CP1-201ENST00000404428 159 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 RPL12P23-201ENST00000405880 490 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 RN7SKP86-201ENST00000410454 332 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 RNA5SP155-201ENST00000411154 129 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 ARL5AP1-201ENST00000418991 388 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AC007562.1-201ENST00000421819 517 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 CYCSP51-201ENST00000443545 318 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 TVP23CP1-201ENST00000450317 639 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 RNU7-136P-201ENST00000458819 69 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AC126389.1-201ENST00000477436 290 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AC068522.1-201ENST00000482895 345 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 UBA52P3-201ENST00000491303 382 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 RN7SL270P-201ENST00000579643 281 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 MIR3118-1-201ENST00000581787 76 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AL670379.11-201ENST00000604059 253 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AL670379.10-201ENST00000604330 253 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AL670379.12-201ENST00000605291 253 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AL670379.9-201ENST00000605428 253 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AC020634.1-201ENST00000608701 549 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AC005514.1-201ENST00000623521 208 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 SNX18P12-201ENST00000624821 759 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 SAMMSON-210ENST00000641260 1308 ntBASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.43□□□□□ -1.38
CUEDC1Q9NWM3 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CUEDC1Q9NWM3 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms