Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AC091178.1-203ENST00000584586 279 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 RPL7P50-201ENST00000600588 727 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 BNIP3P26-201ENST00000600827 554 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AC233280.2-201ENST00000603917 1070 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 MIR7155-201ENST00000615925 56 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AC005086.4-201ENST00000623065 213 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AL136964.1-201ENST00000622038 2990 ntBASIC4.45□□□□□ -1.7
BRF2Q9HAW0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BRF2Q9HAW0 SCN1A-220ENST00000641603 12506 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 RNU6-356P-201ENST00000384140 107 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 MIR506-201ENST00000384998 124 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 SNORD96B-201ENST00000386148 79 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 RNU2-42P-201ENST00000410697 113 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 KRR1P1-201ENST00000419430 803 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC010099.3-201ENST00000423896 409 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 RPL21P91-201ENST00000429231 479 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 PSMD10P3-201ENST00000437000 448 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC005154.2-201ENST00000438110 379 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 RPL23AP16-201ENST00000441715 421 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC004022.1-201ENST00000447766 1066 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 RPL29P29-201ENST00000448725 423 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 TPT1P13-201ENST00000449760 499 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 PPIAP3-201ENST00000450588 505 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AL162388.1-201ENST00000450912 352 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 ISCUP1-201ENST00000454451 448 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 NECAP1P2-201ENST00000455668 727 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC063943.1-201ENST00000465434 453 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 RN7SL329P-201ENST00000467740 299 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC146507.1-201ENST00000468335 354 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC074386.1-201ENST00000476560 767 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 OR5M14P-201ENST00000506803 618 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 RNA5SP446-201ENST00000515955 82 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 RNU6-1225P-201ENST00000516336 65 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 DYNLL1P4-201ENST00000549314 266 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC245036.5-201ENST00000596330 847 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC008966.2-201ENST00000606157 453 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC097478.2-201ENST00000610572 514 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC021755.4-201ENST00000616620 456 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC109809.1-201ENST00000619665 545 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
BRF2Q9HAW0 AC108751.5-201ENST00000492880 1336 ntBASIC4.44□□□□□ -1.7
BRF2Q9HAW0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC025031.4-201ENST00000621248 3271 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 RNA5SP191-201ENST00000362585 102 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 RNU6-1226P-201ENST00000384317 107 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 MIR195-201ENST00000385194 87 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AL645733.1-201ENST00000402250 217 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AL161449.1-201ENST00000414531 1199 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 ELOCP9-201ENST00000418624 239 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 SDCBPP2-201ENST00000424643 885 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 OR51AB1P-201ENST00000429046 620 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 HIGD1AP4-201ENST00000430194 280 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 VN1R54P-201ENST00000435210 1049 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 AL139824.2-201ENST00000458731 1095 ntBASIC4.43□□□□□ -1.7
BRF2Q9HAW0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
BRF2Q9HAW0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms