Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC099669.2-201ENST00000616549 437 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AC018926.3-201ENST00000618841 406 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AP000346.3-201ENST00000622821 210 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AC009452.1-201ENST00000640823 606 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 AC010300.1-201ENST00000600671 5134 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 LINC00561-201ENST00000565815 2738 ntBASIC4.14□□□□□ -1.75
DDX47Q9H0S4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.14□□□□□ -1.75
DDX47Q9H0S4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AL512646.1-201ENST00000269395 1077 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 ATP5F1P4-201ENST00000397288 746 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 HMGB3P19-201ENST00000403971 560 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 HMGB1P37-201ENST00000439613 609 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 UBE2V1P5-201ENST00000440070 405 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 RPS17P13-201ENST00000448974 407 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AC009963.2-201ENST00000453431 138 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 SETP6-201ENST00000479329 568 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AC004069.2-201ENST00000505438 1114 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AC005798.1-201ENST00000513715 387 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 MIR4715-201ENST00000584117 79 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AC004825.2-201ENST00000616634 455 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AC092608.3-201ENST00000625017 386 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AC017104.5-201ENST00000637647 639 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 AC132825.7-201ENST00000638744 335 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
DDX47Q9H0S4 MTND4P10-201ENST00000446199 1363 ntBASIC4.13□□□□□ -1.75
DDX47Q9H0S4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AC046144.1-201ENST00000478559 1853 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AC138393.1-206ENST00000540997 1886 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 OR11H4-201ENST00000315409 1082 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 MIR423-201ENST00000362201 94 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 SNORA60-201ENST00000362396 134 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 RNA5SP447-201ENST00000363749 119 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 PRRC2CP1-201ENST00000404428 159 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 RNU2-21P-201ENST00000410368 188 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 RHEBP3-201ENST00000411920 351 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 CYP4F29P-201ENST00000420685 446 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AL365396.1-201ENST00000430854 671 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 BTF3P10-201ENST00000433415 495 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 RPS26P30-201ENST00000443431 335 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 CYCSP53-201ENST00000455540 265 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 RPS20P21-201ENST00000466859 343 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 OR5H3P-201ENST00000502817 919 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AC025674.1-201ENST00000507074 324 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AC104108.1-201ENST00000509930 412 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AC092851.1-201ENST00000535964 478 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AC110741.2-201ENST00000605278 268 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AL023583.1-201ENST00000607518 1143 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 DCAF13P3-201ENST00000561147 1334 ntBASIC4.12□□□□□ -1.75
DDX47Q9H0S4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
DDX47Q9H0S4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DDX47Q9H0S4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DDX47Q9H0S4 RNA5SP443-201ENST00000363083 132 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms