Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AC015720.2-201ENST00000567709 334 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 AP001180.3-201ENST00000582221 145 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 MIR4697-201ENST00000582977 78 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 AC087763.1-201ENST00000603391 286 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 BCRP9-201ENST00000605312 388 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 AC100810.6-201ENST00000638068 285 ntBASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
UBE2OQ9C0C9 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC026951.1-201ENST00000559530 2459 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC112255.1-201ENST00000624070 2493 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 RNU6-666P-201ENST00000363499 107 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 Y_RNA.315-201ENST00000365117 102 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 Y_RNA.381-201ENST00000365666 102 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 MIR559-201ENST00000385188 96 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 RNU6-373P-201ENST00000411247 98 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC092634.6-201ENST00000418558 192 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 RPL7L1P9-201ENST00000431298 745 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 LSM1P1-201ENST00000438629 273 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 UBE2V1P5-201ENST00000440070 405 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 TRGVB-201ENST00000453257 471 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 RNU6-1046P-201ENST00000516538 107 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC027309.2-201ENST00000520566 192 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AL049779.2-201ENST00000553847 315 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 SUB1P2-201ENST00000556401 297 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC096996.1-201ENST00000563813 325 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC008737.2-201ENST00000599446 118 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC006006.1-201ENST00000603082 144 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 SNRPGP17-201ENST00000603780 214 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC133644.2-201ENST00000608142 540 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 7SK.10-201ENST00000621414 298 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 BIN2P1-201ENST00000504996 1530 ntBASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
UBE2OQ9C0C9 AC139426.3-201ENST00000605648 2059 ntBASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 AC005294.1-201ENST00000355509 281 ntBASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 RNU105B-201ENST00000364478 208 ntBASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 SNORD42.2-201ENST00000365570 69 ntBASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 RNU6-474P-201ENST00000384243 107 ntBASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 MIR433-201ENST00000384837 93 ntBASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 MT-TR-201ENST00000387439 65 ntBASIC6.49□□□□□ -1.37
UBE2OQ9C0C9 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms