Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 ZNF415P1-201ENST00000582279 1166 ntBASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AC020914.6-201ENST00000594327 272 ntBASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AC019131.2-201ENST00000609071 870 ntBASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AL391597.1-201ENST00000618707 694 ntBASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
RPAP1Q9BWH6 AC093311.1-201ENST00000506586 2021 ntBASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 CR381670.1-201ENST00000624291 1693 ntBASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 RNU6-1251P-201ENST00000364502 107 ntBASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AL138878.1-201ENST00000405131 347 ntBASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 PPIAP17-201ENST00000438507 471 ntBASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 PLGLA-201ENST00000465668 449 ntBASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AC005798.1-201ENST00000513715 387 ntBASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 SUMO2P20-201ENST00000520803 283 ntBASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AC092747.2-201ENST00000545069 983 ntBASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AC091515.1-201ENST00000548110 679 ntBASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AC099489.2-201ENST00000574976 260 ntBASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AC004825.2-201ENST00000616634 455 ntBASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 AC244205.2-202ENST00000635781 342 ntBASIC4.52□□□□□ -1.69
RPAP1Q9BWH6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 AL034403.1-201ENST00000399414 885 ntBASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 RPL23AP4-201ENST00000427757 463 ntBASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 CYCSP4-201ENST00000429682 331 ntBASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 Z85994.2-201ENST00000434327 452 ntBASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 RPS26P40-201ENST00000435209 294 ntBASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 TPTE2P1-204ENST00000435256 593 ntBASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 AC104978.1-201ENST00000449387 391 ntBASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 AC073387.1-201ENST00000453261 709 ntBASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 OR8I1P-201ENST00000529291 931 ntBASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 VN1R92P-201ENST00000598511 928 ntBASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 BNIP3P11-201ENST00000603878 563 ntBASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 AC110741.2-201ENST00000605278 268 ntBASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 MIR7975-201ENST00000619350 68 ntBASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RPAP1Q9BWH6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 MT-TP-201ENST00000387461 68 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 RPS7P15-201ENST00000415804 584 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AL691447.1-201ENST00000419456 387 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 HIGD1AP12-201ENST00000427832 281 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AC022022.1-201ENST00000430304 178 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 MTCO1P45-201ENST00000431457 267 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AL035551.1-201ENST00000446931 348 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AC239809.1-201ENST00000450470 217 ntBASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.5□□□□□ -1.69
RPAP1Q9BWH6 APOOP2-201ENST00000461561 539 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms