Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 RPL23AP61-201ENST00000623642 466 ntBASIC5.35□□□□□ -1.55
SIN3AQ96ST3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.35□□□□□ -1.55
SIN3AQ96ST3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIN3AQ96ST3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIN3AQ96ST3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.35□□□□□ -1.55
SIN3AQ96ST3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIN3AQ96ST3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIN3AQ96ST3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.35□□□□□ -1.55
SIN3AQ96ST3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 AL034403.1-201ENST00000399414 885 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 TAF9BP2-201ENST00000400856 499 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 LAP3P1-201ENST00000403648 294 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 AL035423.1-201ENST00000420331 213 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 AC006480.1-201ENST00000449887 378 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 RN7SL93P-201ENST00000463035 293 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 AC006511.1-201ENST00000470614 315 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 RPS6P4-201ENST00000494693 758 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 RNU1-95P-201ENST00000516357 160 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 RNA5SP164-201ENST00000516533 110 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 RNU1-128P-201ENST00000516704 160 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 HAUS1P3-201ENST00000523909 662 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 AC112230.1-201ENST00000604342 547 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 AL451049.1-201ENST00000608672 497 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 CASC19-284ENST00000642142 1868 ntBASIC5.34□□□□□ -1.55
SIN3AQ96ST3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.34□□□□□ -1.55
SIN3AQ96ST3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 SAGE2P-201ENST00000420011 2126 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 RAD1P1-201ENST00000231383 813 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AL158050.1-201ENST00000416077 457 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AC093084.1-201ENST00000424233 687 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AL035246.1-201ENST00000433554 1255 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AC092809.1-201ENST00000441469 474 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 SETD6P1-201ENST00000444575 317 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 SNORA84-201ENST00000459229 133 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AC093801.2-201ENST00000503966 1050 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 NAMPTP2-201ENST00000505629 1115 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AC023158.1-201ENST00000561632 1025 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 MIR3922-201ENST00000585192 84 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 EIF1P6-201ENST00000600054 334 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AC009269.6-201ENST00000621778 588 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 AC018529.3-201ENST00000624212 2254 ntBASIC5.33□□□□□ -1.56
SIN3AQ96ST3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.33□□□□□ -1.56
SIN3AQ96ST3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 RNU1-18P-201ENST00000363062 164 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 RPL21P17-201ENST00000397467 475 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 RSL24D1P1-201ENST00000404972 493 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 AC069282.1-201ENST00000411911 526 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 HMGB3P20-201ENST00000417997 600 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 PTP4A1P1-201ENST00000420539 515 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 AL157827.1-201ENST00000447622 132 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 CLIC4P1-201ENST00000453177 535 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 SNORA67.7-201ENST00000516664 135 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 AC025918.2-201ENST00000558683 763 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 CBX3P2-202ENST00000583365 535 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.32□□□□□ -1.56
SIN3AQ96ST3 AP001033.2-201ENST00000609701 1003 ntBASIC5.32□□□□□ -1.56
SIN3AQ96ST3 AC104763.3-201ENST00000613765 618 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms