Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AC006326.1-201ENST00000445465 787 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 RPL34P26-201ENST00000445636 354 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 RPL7P31-201ENST00000450192 724 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AC091153.1-201ENST00000466297 402 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 PPIAP15-201ENST00000479662 484 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRC58Q96CX6 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.59□□□□□ -1.83
LRRC58Q96CX6 SLC25A15P5-201ENST00000508033 253 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AC108471.1-201ENST00000513977 287 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 RNU6-1004P-201ENST00000516584 111 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 RNU6-1308P-201ENST00000516817 103 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.59□□□□□ -1.83
LRRC58Q96CX6 OR5AP1P-201ENST00000529730 940 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRC58Q96CX6 MIR4716-201ENST00000579628 84 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AC005242.1-201ENST00000585658 438 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AL139286.1-201ENST00000604465 483 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AL021368.1-201ENST00000607490 540 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 RNVU1-4-201ENST00000612985 164 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC58Q96CX6 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AC000123.2-201ENST00000623124 461 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AC091948.2-201ENST00000636510 279 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AC073073.2-201ENST00000609827 2578 ntBASIC3.59□□□□□ -1.83
LRRC58Q96CX6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LRRC58Q96CX6 AL356489.2-201ENST00000566968 3528 ntBASIC3.59□□□□□ -1.84
LRRC58Q96CX6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
LRRC58Q96CX6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 MIR134-201ENST00000385258 73 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 SNORA48.7-201ENST00000391302 135 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 RNA5SP317-201ENST00000410176 116 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 SNORA57.3-201ENST00000411095 141 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 RNA5SP311-201ENST00000411290 116 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 ZFAND6P1-201ENST00000434138 605 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AC006480.1-201ENST00000449887 378 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 HMGB3P21-201ENST00000452483 547 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 RPS7P7-201ENST00000463499 571 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 NPM1P17-201ENST00000479221 602 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 RPS3AP50-201ENST00000487064 803 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 RNA5SP315-201ENST00000516340 116 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 RNA5SP312-201ENST00000517068 116 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AC022884.3-201ENST00000579571 248 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AL354760.1-201ENST00000608357 643 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AC009501.3-201ENST00000605001 1352 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 AC134882.1-201ENST00000603738 1676 ntBASIC3.58□□□□□ -1.84
LRRC58Q96CX6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LRRC58Q96CX6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 RNU6-185P-201ENST00000384421 107 ntBASIC3.57□□□□□ -1.84
LRRC58Q96CX6 RNU1-13P-201ENST00000384499 162 ntBASIC3.57□□□□□ -1.84
LRRC58Q96CX6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 RPL32P23-201ENST00000397237 405 ntBASIC3.57□□□□□ -1.84
LRRC58Q96CX6 AC025750.1-201ENST00000399891 379 ntBASIC3.57□□□□□ -1.84
LRRC58Q96CX6 AL022722.2-201ENST00000402519 180 ntBASIC3.57□□□□□ -1.84
LRRC58Q96CX6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 AC048351.1-201ENST00000420064 602 ntBASIC3.57□□□□□ -1.84
LRRC58Q96CX6 RPS24P8-201ENST00000431490 402 ntBASIC3.57□□□□□ -1.84
LRRC58Q96CX6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 AL359073.1-201ENST00000448036 403 ntBASIC3.57□□□□□ -1.84
LRRC58Q96CX6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 RNU6-1218P-201ENST00000458990 108 ntBASIC3.57□□□□□ -1.84
LRRC58Q96CX6 CABYRP1-201ENST00000465493 1045 ntBASIC3.57□□□□□ -1.84
LRRC58Q96CX6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.57□□□□□ -1.84
LRRC58Q96CX6 RPL23AP73-201ENST00000492507 471 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms