Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 U3.53-201ENST00000628922 216 ntBASIC4.05□□□□□ -1.76
PTP4A1Q93096 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.05□□□□□ -1.76
PTP4A1Q93096 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.05□□□□□ -1.76
PTP4A1Q93096 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTP4A1Q93096 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PTP4A1Q93096 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.05□□□□□ -1.76
PTP4A1Q93096 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTP4A1Q93096 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTP4A1Q93096 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTP4A1Q93096 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTP4A1Q93096 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC139769.1-204ENST00000472297 1931 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC067945.1-201ENST00000342609 618 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 RN7SKP103-201ENST00000363848 320 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTP4A1Q93096 RPL31P1-201ENST00000398116 372 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 MIR298-201ENST00000401212 88 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 AL023807.1-201ENST00000407932 359 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 RNU2-37P-201ENST00000410695 177 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC013262.1-201ENST00000426710 252 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AP000949.1-201ENST00000438328 629 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 TRBV26-201ENST00000456572 344 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AL592156.1-201ENST00000508758 304 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC015795.1-201ENST00000513669 327 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 HMGN1P15-201ENST00000513870 295 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AP006289.1-201ENST00000538089 277 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC012182.1-201ENST00000570133 895 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AL138721.1-201ENST00000616756 179 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 MIR6853-201ENST00000619642 74 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 MIR6730-201ENST00000622213 67 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC112200.1-201ENST00000625015 234 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTP4A1Q93096 MIR4278-201ENST00000636094 69 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTP4A1Q93096 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.04□□□□□ -1.76
PTP4A1Q93096 AC117529.2-201ENST00000512159 2068 ntBASIC4.04□□□□□ -1.76
PTP4A1Q93096 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTP4A1Q93096 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.03□□□□□ -1.76
PTP4A1Q93096 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PTP4A1Q93096 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.03□□□□□ -1.76
PTP4A1Q93096 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTP4A1Q93096 MAPK10-253ENST00000641010 4072 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTP4A1Q93096 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.03□□□□□ -1.76
PTP4A1Q93096 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTP4A1Q93096 CPHL1P-201ENST00000461341 3407 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.03□□□□□ -1.76
PTP4A1Q93096 LINC00622-201ENST00000562811 1570 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PTP4A1Q93096 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTP4A1Q93096 AC021146.4-201ENST00000309229 279 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 RNU5B-4P-201ENST00000363508 111 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTP4A1Q93096 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTP4A1Q93096 RNA5SP87-201ENST00000384155 118 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 RNU6-1181P-201ENST00000384191 106 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 MIR513A2-201ENST00000385249 127 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 AL139098.1-201ENST00000407291 389 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 AL133384.1-201ENST00000412744 351 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 AL139128.1-201ENST00000413921 941 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 UBTFL3-201ENST00000418934 1024 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.03□□□□□ -1.76
PTP4A1Q93096 PTP4A1P5-201ENST00000420305 455 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 RPS6P14-201ENST00000425165 719 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.03□□□□□ -1.76
PTP4A1Q93096 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.03□□□□□ -1.76
PTP4A1Q93096 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.03□□□□□ -1.76
PTP4A1Q93096 USP9YP9-201ENST00000429406 715 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 ELOCP13-201ENST00000443934 329 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.03□□□□□ -1.76
PTP4A1Q93096 RPL9P32-201ENST00000464118 620 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 AC010301.1-201ENST00000473936 355 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 UBTFL6-201ENST00000477929 1024 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 GAPDHP39-201ENST00000481866 979 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 AC083982.1-201ENST00000485679 344 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 AP001086.1-201ENST00000494882 321 ntBASIC4.03□□□□□ -1.76
PTP4A1Q93096 AC231760.1-201ENST00000498002 260 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms