Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 RNA5SP97-201ENST00000365006 84 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 MIR199A2-201ENST00000385289 110 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AL117339.2-201ENST00000430475 180 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 OR4C10P-201ENST00000434991 931 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 XKRY2-201ENST00000442362 1093 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AC089999.1-201ENST00000460336 374 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AC010683.1-201ENST00000473673 378 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 PPIAP15-201ENST00000479662 484 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 NDUFA5P2-201ENST00000519723 344 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AC008489.1-201ENST00000524271 483 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 CYP2C60P-201ENST00000566088 139 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AC012557.1-201ENST00000607115 611 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AL391834.1-201ENST00000609609 560 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 CR589904.2-201ENST00000612533 440 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 AL162233.1-201ENST00000620014 944 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.16□□□□□ -1.9
RTN4IP1Q8WWV3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
RTN4IP1Q8WWV3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 SNORA57.3-201ENST00000411095 141 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 RAB28P1-201ENST00000411517 641 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AL159169.1-201ENST00000421119 127 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 CR848007.2-201ENST00000424918 787 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 USP9YP7-201ENST00000436723 430 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 MTCO3P43-201ENST00000440974 771 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 RPL21P89-201ENST00000444021 467 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 RPS15AP29-201ENST00000445539 400 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 RPS29P31-201ENST00000446147 164 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AL157827.1-201ENST00000447622 132 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 USP9YP32-201ENST00000452432 430 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 RPS4XP15-201ENST00000489210 795 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 TPT1P3-201ENST00000492841 512 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AC108941.1-201ENST00000502853 530 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 FTH1P21-201ENST00000512179 511 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 HMGB1P46-201ENST00000520062 610 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 NOP56P3-201ENST00000549457 385 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AGGF1P6-201ENST00000569213 976 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 KLKP1-201ENST00000595979 403 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 MTCO3P22-201ENST00000603219 784 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AP004372.1-201ENST00000604842 844 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AC092653.1-201ENST00000608509 531 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 ZYXP1-201ENST00000617638 118 ntBASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
RTN4IP1Q8WWV3 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RTN4IP1Q8WWV3 PWAR6-201ENST00000552334 4618 ntBASIC3.14□□□□□ -1.91
RTN4IP1Q8WWV3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.14□□□□□ -1.91
RTN4IP1Q8WWV3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms