Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC124293.1-201ENST00000530034 493 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AP005205.1-201ENST00000563503 508 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC009220.3-201ENST00000604318 586 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC092354.1-201ENST00000606057 376 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC010857.1-201ENST00000606398 594 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AL159169.2-201ENST00000610061 1269 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AC024595.1-201ENST00000623088 387 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 RBPJP2-201ENST00000618187 1444 ntBASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC44A3Q8N4M1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 Y_RNA.408-201ENST00000383987 102 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 RNU6-244P-201ENST00000391028 104 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 TAF9BP1-201ENST00000396646 746 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 MTND1P21-201ENST00000412991 285 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 CEACAMP8-201ENST00000413902 580 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 TCEA1P4-201ENST00000415066 844 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 GAPDHP49-201ENST00000421421 961 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 CYCSP46-201ENST00000423569 204 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 FABP7P1-201ENST00000424004 391 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 RPL7AP49-201ENST00000429522 581 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AL591438.1-201ENST00000433508 581 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 MTCO1P52-201ENST00000433928 531 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AL450023.3-201ENST00000440592 271 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 HMGB1P16-201ENST00000447155 540 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 CFTRP1-201ENST00000456646 183 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 RPL5P24-201ENST00000463742 885 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC010618.1-201ENST00000469924 477 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 GAPDHP39-201ENST00000481866 979 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC093840.1-201ENST00000511599 336 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 IGHV3-63-201ENST00000518422 341 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 OR4C2P-201ENST00000530855 1064 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC005832.3-201ENST00000537929 631 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC136619.2-201ENST00000563361 631 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC012435.1-202ENST00000568772 240 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 MTND1P15-201ENST00000579262 949 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 KPNA2P3-201ENST00000584190 848 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC022726.1-201ENST00000587475 207 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC083899.3-201ENST00000603413 594 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 BNIP3P4-201ENST00000604946 565 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 NDUFA8P1-201ENST00000605525 367 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AL109618.2-201ENST00000605527 211 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC069234.5-201ENST00000611056 416 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC008498.1-201ENST00000613012 531 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC007342.8-201ENST00000623278 678 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 AC127502.3-201ENST00000636170 1206 ntBASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC44A3Q8N4M1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms