Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC105402.2-201ENST00000438503 358 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AC092393.1-201ENST00000439625 742 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AL031584.1-201ENST00000447169 754 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 snoU13.22-201ENST00000459428 104 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AC005410.1-202ENST00000460347 485 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AC126121.1-201ENST00000482313 553 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 SOD1P3-201ENST00000518682 454 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AC005868.1-201ENST00000536421 331 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 FKBP1BP1-201ENST00000553366 325 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 MIR3158-1-201ENST00000583596 81 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AL136164.3-201ENST00000624429 3978 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 AC093535.2-201ENST00000624769 2326 ntBASIC4.93□□□□□ -1.62
HERC6Q8IVU3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HERC6Q8IVU3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 AC016716.1-201ENST00000265882 708 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 NACA3P-201ENST00000359690 648 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 RNU4-92P-201ENST00000363783 136 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 RNU1-132P-201ENST00000364300 164 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 BMS1P3-201ENST00000372011 932 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 RPL23AP38-201ENST00000423801 469 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 MTCO1P54-201ENST00000430139 712 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 USP9YP22-201ENST00000438971 294 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 CR769776.1-201ENST00000441254 787 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 PTMAP3-201ENST00000447474 330 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 RPL7P59-201ENST00000447700 943 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 PNPLA4P1-201ENST00000458328 305 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 UBA52P3-201ENST00000491303 382 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 AC023632.4-201ENST00000517783 191 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 AC053481.3-201ENST00000577881 843 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 VN1R83P-201ENST00000595685 445 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 AP002782.1-201ENST00000623107 614 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 AC090506.2-201ENST00000624521 419 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 AC068620.4-201ENST00000636730 1182 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 MFSD8-242ENST00000641690 4199 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 Z99496.1-201ENST00000469424 1477 ntBASIC4.92□□□□□ -1.62
HERC6Q8IVU3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
HERC6Q8IVU3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 OR5P1P-201ENST00000299512 925 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 MIR383-201ENST00000362257 73 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 RNU1-130P-201ENST00000363930 160 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 HIGD1AP15-201ENST00000416198 280 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 AC233981.1-201ENST00000423224 461 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 RPL21P71-201ENST00000465598 459 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 AC108475.1-201ENST00000507880 950 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 AC005351.1-201ENST00000511152 786 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 RN7SKP46-201ENST00000515942 234 ntBASIC4.91□□□□□ -1.62
HERC6Q8IVU3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.91□□□□□ -1.62
HERC6Q8IVU3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms