Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC018692.3-201ENST00000623929 123 ntBASIC2.7□□□□□ -1.98
VPS13CQ709C8 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13CQ709C8 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13CQ709C8 U3.12-201ENST00000364498 214 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 SNORA67.4-201ENST00000384688 142 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13CQ709C8 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 AL139281.1-201ENST00000422120 335 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 EIF4EP1-201ENST00000422311 642 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 RN7SKP209-201ENST00000516888 304 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 KCTD9P6-201ENST00000522306 950 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 AC022080.3-201ENST00000544433 482 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 AC004832.5-201ENST00000608677 401 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 ZNF826P-207ENST00000622273 1910 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 AL035425.3-201ENST00000564206 4996 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 IL6-203ENST00000401651 539 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 NUP35P1-201ENST00000422734 947 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 AC093156.1-201ENST00000440382 670 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 TXNP1-201ENST00000441872 371 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13CQ709C8 NMD3P1-201ENST00000439704 1488 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13CQ709C8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13CQ709C8 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13CQ709C8 SNORD67-201ENST00000390833 111 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 ARL6IP1P2-201ENST00000431356 563 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 AL513124.1-201ENST00000450410 614 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VPS13CQ709C8 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
VPS13CQ709C8 NDUFB9P3-201ENST00000521269 501 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 UBTFL9-201ENST00000534504 1148 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 AL035413.2-201ENST00000604801 525 ntBASIC2.69□□□□□ -1.98
VPS13CQ709C8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13CQ709C8 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13CQ709C8 AL078595.2-201ENST00000605309 1780 ntBASIC2.68□□□□□ -1.98
VPS13CQ709C8 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 AL513302.2-201ENST00000562313 1842 ntBASIC2.68□□□□□ -1.98
VPS13CQ709C8 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13CQ709C8 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.68□□□□□ -1.98
VPS13CQ709C8 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 SNRPCP3-201ENST00000474888 476 ntBASIC2.68□□□□□ -1.98
VPS13CQ709C8 AK5-208ENST00000478255 556 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 BTG4P1-201ENST00000510421 183 ntBASIC2.68□□□□□ -1.98
VPS13CQ709C8 OR6R2P-201ENST00000609216 300 ntBASIC2.68□□□□□ -1.98
VPS13CQ709C8 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13CQ709C8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13CQ709C8 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13CQ709C8 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13CQ709C8 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13CQ709C8 MRPL50P2-201ENST00000416821 482 ntBASIC2.68□□□□□ -1.98
VPS13CQ709C8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 AC005189.1-201ENST00000431286 310 ntBASIC2.68□□□□□ -1.98
VPS13CQ709C8 AP000926.4-201ENST00000527351 454 ntBASIC2.68□□□□□ -1.98
VPS13CQ709C8 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 MIR4524B-201ENST00000581569 115 ntBASIC2.68□□□□□ -1.98
VPS13CQ709C8 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 AP003485.2-201ENST00000623636 610 ntBASIC2.68□□□□□ -1.98
VPS13CQ709C8 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13CQ709C8 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13CQ709C8 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
VPS13CQ709C8 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13CQ709C8 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13CQ709C8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VPS13CQ709C8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 USP9YP2-201ENST00000504503 1000 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 USP9YP1-201ENST00000513521 1002 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 OR4C2P-201ENST00000530855 1064 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS13CQ709C8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 YWHAEP4-201ENST00000505390 198 ntBASIC2.67□□□□□ -1.98
VPS13CQ709C8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS13CQ709C8 OR51C1P-201ENST00000608504 942 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms