Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AL022345.1-201ENST00000607292 135 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AC243773.3-201ENST00000613270 256 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 AL122023.1-201ENST00000622847 530 ntBASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
FOXR1Q6PIV2 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 MTND5P28-201ENST00000438005 1594 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC007998.4-201ENST00000612496 2533 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 RNU4-1-201ENST00000363925 141 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 PPIAP26-201ENST00000377951 522 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 RNU6-1032P-201ENST00000384100 107 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 RNA5SP474-201ENST00000391234 90 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 MTCO2P33-201ENST00000402100 465 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 RNU2-64P-201ENST00000411315 191 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC127526.1-201ENST00000417526 366 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 MCFD2P1-201ENST00000417812 300 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 CYP4F30P-202ENST00000420048 405 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AL354766.1-201ENST00000423396 542 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 ERLEC1P1-201ENST00000433806 578 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 HMGB3P11-201ENST00000440127 604 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AL035666.1-201ENST00000446195 348 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 RPS27AP3-201ENST00000453803 454 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 RPL12P25-201ENST00000455592 494 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC022415.1-202ENST00000486612 523 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 RPSAP51-201ENST00000497462 645 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 FAM206BP-201ENST00000510179 541 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 RPL7P20-201ENST00000520308 745 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC123904.2-201ENST00000548059 300 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 NPM1P42-201ENST00000560329 862 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC124068.1-201ENST00000563131 678 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC233702.7-202ENST00000582941 211 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC016727.2-201ENST00000603988 621 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC015982.1-201ENST00000608113 465 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AP001521.1-201ENST00000609150 300 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC007485.1-201ENST00000616755 206 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC061999.1-201ENST00000624454 177 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 SNORA16A-202ENST00000628458 135 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 AC111152.1-202ENST00000635848 339 ntBASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.48□□□□□ -1.37
FOXR1Q6PIV2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 MTND5P19-201ENST00000424872 1794 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 MIR133A2-201ENST00000347538 102 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 Y_RNA.373-201ENST00000365600 103 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 RNU6-606P-201ENST00000384721 111 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AL359694.1-201ENST00000403247 604 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 RN7SKP17-201ENST00000411242 351 ntBASIC6.47□□□□□ -1.37
FOXR1Q6PIV2 AC073264.1-201ENST00000411508 416 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms