Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF43Q68DV7 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RNF43Q68DV7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF43Q68DV7 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF43Q68DV7 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF43Q68DV7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF43Q68DV7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF43Q68DV7 MIR375-201ENST00000362103 64 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 RNU6-462P-201ENST00000362659 105 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 RNU6-1322P-201ENST00000364309 107 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 SNORD42.2-201ENST00000365570 69 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 RNU4-31P-201ENST00000384211 141 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 SNORA70-201ENST00000384436 135 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 METTL15P3-201ENST00000415522 1221 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 GAPDHP49-201ENST00000421421 961 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 AL358176.2-201ENST00000425769 204 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 AL445669.1-201ENST00000426743 755 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 PPIAP17-201ENST00000438507 471 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 SEPT14P3-201ENST00000439401 183 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 Z98949.2-201ENST00000440996 144 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 AL732372.2-207ENST00000445840 183 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 AC132479.1-201ENST00000449160 144 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 NPM1P39-201ENST00000449818 867 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 AL606490.1-201ENST00000452266 765 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 SEPT14P2-201ENST00000453405 183 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 Y_RNA.631-201ENST00000459607 101 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 SNORD19B-201ENST00000459623 84 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 AC104849.1-201ENST00000462623 405 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 CDH12P2-201ENST00000504393 298 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 SEPT14P4-201ENST00000513445 186 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 MTND5P4-201ENST00000514978 288 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 Y_RNA.711-201ENST00000516993 102 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 RNU2-46P-201ENST00000517038 113 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 FO082796.1-201ENST00000523795 183 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 AP000790.1-201ENST00000528891 737 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 AC141257.3-201ENST00000572906 215 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 MIR4503-201ENST00000582187 83 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 AC016925.2-201ENST00000605108 242 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 AC090948.1-201ENST00000607464 549 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 AC019193.3-201ENST00000609144 554 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF43Q68DV7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF43Q68DV7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF43Q68DV7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF43Q68DV7 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RNF43Q68DV7 AC018628.1-201ENST00000624147 3819 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 THAP12P9-201ENST00000503971 2360 ntBASIC6.07□□□□□ -1.44
RNF43Q68DV7 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.07□□□□□ -1.44
RNF43Q68DV7 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RNF43Q68DV7 AL034546.1-201ENST00000623740 3693 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF43Q68DV7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF43Q68DV7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
RNF43Q68DV7 RNU6-1309P-201ENST00000363305 108 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 RNU6-359P-201ENST00000365466 108 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 RNU6-43P-201ENST00000384302 107 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 TXNP7-201ENST00000406296 293 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 SNRPEP6-201ENST00000407465 277 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 Y_RNA.608-201ENST00000410647 95 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 RN7SKP216-201ENST00000411050 312 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 OR2AT2P-201ENST00000413438 905 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 MTCO3P46-201ENST00000425787 232 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 AP001324.1-201ENST00000428553 399 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC007559.1-201ENST00000428736 355 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 NPM1P34-201ENST00000428821 893 ntBASIC6.06□□□□□ -1.44
RNF43Q68DV7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.06□□□□□ -1.44
RNF43Q68DV7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms