Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
VPS13DQ5THJ4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC011503.2-201ENST00000594230 1500 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 SNORA7.4-201ENST00000384249 137 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 TAF9BP1-201ENST00000396646 746 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 A2MP1-204ENST00000566278 4130 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 RNU4-82P-201ENST00000362443 140 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC069540.1-201ENST00000446320 988 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 ASNSP4-201ENST00000511103 447 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AL390334.1-201ENST00000556395 450 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 FAM35DP-201ENST00000323387 2712 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AL357075.1-201ENST00000404107 726 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AL139132.1-201ENST00000431587 344 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC074367.1-201ENST00000438685 1125 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 OR4C2P-201ENST00000530855 1064 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AP003392.5-201ENST00000607857 415 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC004832.5-201ENST00000608677 401 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 SNORA54-201ENST00000384281 123 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 OR1AA1P-201ENST00000419597 916 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 HMGN2P7-201ENST00000456186 273 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 RN7SL432P-201ENST00000484057 298 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC109329.2-201ENST00000519658 482 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 OR4R3P-201ENST00000525084 838 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC135001.1-201ENST00000544546 283 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AL096803.3-201ENST00000609032 532 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 AC022149.2-201ENST00000621061 203 ntBASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS13DQ5THJ4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 RPS4XP8-201ENST00000402039 771 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AL160275.2-201ENST00000412010 394 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 HMGB3P20-201ENST00000417997 600 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AL360157.1-201ENST00000565962 87 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 TPTE2P3-201ENST00000441562 1189 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AP000942.1-201ENST00000463969 747 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AC005798.1-201ENST00000513715 387 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 CYCSP39-201ENST00000565821 309 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AC136601.2-201ENST00000604356 474 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 MIR486-1-201ENST00000612171 68 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AL596275.2-204ENST00000641628 552 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AL596275.2-206ENST00000641957 626 ntBASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13DQ5THJ4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms