Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 RNU6-1120P-201ENST00000362988 108 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 RNU6-492P-201ENST00000363035 104 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 RNA5SP514-201ENST00000363717 111 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 TMSB4XP8-201ENST00000402089 135 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AL390316.1-201ENST00000406279 553 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 RN7SKP151-201ENST00000410230 316 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AC127391.1-201ENST00000411737 98 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 TMSB4XP6-201ENST00000415187 135 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AL451054.2-201ENST00000420896 202 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 TMSB4XP1-201ENST00000424567 135 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AC104849.1-201ENST00000462623 405 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AC026254.2-201ENST00000475295 371 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 RPS4XP1-201ENST00000482189 787 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AC106872.3-201ENST00000495104 446 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AC072052.1-201ENST00000496556 306 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 RPL38P4-201ENST00000502376 214 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AP000889.2-201ENST00000532684 490 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AC008782.1-201ENST00000603386 430 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AL133338.2-201ENST00000604292 736 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AL133173.2-201ENST00000614270 90 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AL133216.2-202ENST00000634512 349 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AC135068.12-201ENST00000637370 931 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 AL596275.2-208ENST00000641192 594 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
RC3H1Q5TC82 SPATA2P1-201ENST00000431223 2055 ntBASIC7.34□□□□□ -1.23
RC3H1Q5TC82 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.24
RC3H1Q5TC82 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
RC3H1Q5TC82 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 RIOK3P1-201ENST00000418778 1528 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 Y_RNA.257-201ENST00000364596 102 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 RNU6-456P-201ENST00000384493 107 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 RNU2-8P-201ENST00000410727 190 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 RN7SKP216-201ENST00000411050 312 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 Y_RNA.625-201ENST00000411256 107 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 OR10T1P-201ENST00000424327 947 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AC005517.2-201ENST00000424673 553 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 LSM1P1-201ENST00000438629 273 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AL049734.2-201ENST00000441066 616 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 BNIP3P2-201ENST00000441221 577 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 SLC31A1P1-201ENST00000451221 567 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 BTF3P5-201ENST00000457252 467 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 RN7SL222P-201ENST00000476452 299 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 NPM1P41-201ENST00000512920 831 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AC093303.1-201ENST00000514549 295 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 Vault.3-201ENST00000516676 95 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AP003181.2-201ENST00000528941 181 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AP002404.1-201ENST00000532005 451 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 NMNAT1P1-201ENST00000554095 876 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 MRPS21P7-201ENST00000566937 238 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 MIR4680-201ENST00000580906 66 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 RN7SL708P-201ENST00000580952 299 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AC005357.1-201ENST00000588399 301 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 RNU6-87P-201ENST00000607561 108 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AC244517.12-201ENST00000623581 663 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AC079597.1-201ENST00000624306 508 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 AC009161.2-201ENST00000624626 138 ntBASIC7.33□□□□□ -1.24
RC3H1Q5TC82 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
RC3H1Q5TC82 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms