Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
VARS2Q5ST30 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
VARS2Q5ST30 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARS2Q5ST30 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARS2Q5ST30 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VARS2Q5ST30 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARS2Q5ST30 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VARS2Q5ST30 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARS2Q5ST30 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARS2Q5ST30 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 RNU6-1287P-201ENST00000362914 107 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 RNU6-1060P-201ENST00000384664 107 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 RPL9P21-201ENST00000392269 505 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 RNU6-272P-201ENST00000411028 104 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 RNA5SP498-201ENST00000411342 120 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 THEM7P-201ENST00000419556 672 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 AL353997.1-201ENST00000432936 108 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 TIMM8BP2-201ENST00000445940 251 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 EEF1B2P3-201ENST00000447718 678 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC118758.1-202ENST00000454719 225 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 CYCSP34-201ENST00000458172 304 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 RN7SL809P-201ENST00000482040 297 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 RN7SL170P-201ENST00000487098 295 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC097462.2-201ENST00000504623 481 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 IGLVIV-64-201ENST00000518581 301 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 SULT1C2P2-201ENST00000562517 294 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC233702.2-202ENST00000562547 291 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 RPL7P50-201ENST00000600588 727 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC012175.1-201ENST00000603755 531 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC008555.7-201ENST00000605008 583 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 U6.101-201ENST00000637707 76 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC079949.2-201ENST00000617117 2933 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARS2Q5ST30 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARS2Q5ST30 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARS2Q5ST30 RBBP8P1-201ENST00000449447 1844 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 COL6A4P1-202ENST00000487147 4317 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VARS2Q5ST30 AC008725.1-201ENST00000605123 2263 ntBASIC7.38□□□□□ -1.23
VARS2Q5ST30 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
VARS2Q5ST30 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VARS2Q5ST30 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 RNU6-666P-201ENST00000363499 107 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 RN7SKP15-201ENST00000364742 309 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 RPS29P13-201ENST00000402041 169 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 AL024474.1-201ENST00000404655 591 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 RPLP0P7-201ENST00000416050 667 ntBASIC7.37□□□□□ -1.23
VARS2Q5ST30 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC7.37□□□□□ -1.23
VARS2Q5ST30 RPS10P18-201ENST00000442662 495 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms