Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.27□□□□□ -1.73
CACNA1SQ13698 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CACNA1SQ13698 AL606537.1-201ENST00000607258 2011 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 RNU6-729P-201ENST00000384399 107 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 MTND4LP20-201ENST00000402379 270 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 OR1AA1P-201ENST00000419597 916 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 BX842559.1-201ENST00000419615 532 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.26□□□□□ -1.73
CACNA1SQ13698 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.26□□□□□ -1.73
CACNA1SQ13698 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.26□□□□□ -1.73
CACNA1SQ13698 RPL23AP71-201ENST00000470966 469 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 AC084357.1-201ENST00000473404 255 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.26□□□□□ -1.73
CACNA1SQ13698 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.26□□□□□ -1.73
CACNA1SQ13698 IGKV2-26-201ENST00000518305 343 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 MTCO3P22-201ENST00000603219 784 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 AL163642.2-201ENST00000604722 1019 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.26□□□□□ -1.73
CACNA1SQ13698 AL732618.1-201ENST00000623251 301 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CACNA1SQ13698 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CACNA1SQ13698 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CACNA1SQ13698 AC093909.5-201ENST00000621839 1799 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CACNA1SQ13698 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CACNA1SQ13698 U3.19-201ENST00000390893 196 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 SETP15-201ENST00000412724 337 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 AC234781.4-201ENST00000419384 244 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 MTND2P11-201ENST00000423638 648 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.26□□□□□ -1.73
CACNA1SQ13698 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.26□□□□□ -1.73
CACNA1SQ13698 AC023141.12-201ENST00000512399 199 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 HMGB1P19-201ENST00000517578 577 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.26□□□□□ -1.73
CACNA1SQ13698 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.26□□□□□ -1.73
CACNA1SQ13698 AC010653.1-201ENST00000571108 881 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 AC027281.1-201ENST00000574178 758 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 AC067852.3-201ENST00000589177 561 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 MIR4727-201ENST00000622232 55 ntBASIC4.26□□□□□ -1.73
CACNA1SQ13698 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.25□□□□□ -1.73
CACNA1SQ13698 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CACNA1SQ13698 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.25□□□□□ -1.73
CACNA1SQ13698 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.25□□□□□ -1.73
CACNA1SQ13698 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CACNA1SQ13698 MFSD8-233ENST00000641482 4860 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CACNA1SQ13698 TAF9BP1-201ENST00000396646 746 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 Z99755.1-201ENST00000414048 380 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 OR6C64P-201ENST00000419708 825 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 RPL23AP82-202ENST00000427528 469 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 AC008065.1-201ENST00000428525 348 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 CENPBD1P1-201ENST00000464061 469 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 NPM1P17-201ENST00000479221 602 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 RNU6-964P-201ENST00000516524 69 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 OR5AP1P-201ENST00000529730 940 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 AC124856.1-201ENST00000600819 896 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.25□□□□□ -1.73
CACNA1SQ13698 AC073657.2-201ENST00000605661 303 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 AC009237.17-201ENST00000618111 748 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 SNORD39.4-201ENST00000620099 78 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CACNA1SQ13698 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CACNA1SQ13698 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CACNA1SQ13698 AC119744.1-201ENST00000454746 1715 ntBASIC4.25□□□□□ -1.73
CACNA1SQ13698 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CACNA1SQ13698 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CACNA1SQ13698 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.25□□□□□ -1.73
CACNA1SQ13698 KPNA2P2-201ENST00000419546 1489 ntBASIC4.24□□□□□ -1.73
CACNA1SQ13698 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 MIR448-201ENST00000362131 111 ntBASIC4.24□□□□□ -1.73
CACNA1SQ13698 RNU1-140P-201ENST00000365040 165 ntBASIC4.24□□□□□ -1.73
CACNA1SQ13698 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 RPL23AP69-201ENST00000431134 458 ntBASIC4.24□□□□□ -1.73
CACNA1SQ13698 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 AC004069.2-201ENST00000505438 1114 ntBASIC4.24□□□□□ -1.73
CACNA1SQ13698 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CACNA1SQ13698 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CACNA1SQ13698 AC011503.2-201ENST00000594230 1500 ntBASIC4.24□□□□□ -1.73
CACNA1SQ13698 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CACNA1SQ13698 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CACNA1SQ13698 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CACNA1SQ13698 ZNF807-201ENST00000328088 1707 ntBASIC4.24□□□□□ -1.73
CACNA1SQ13698 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CACNA1SQ13698 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 AC073522.1-201ENST00000483312 377 ntBASIC4.24□□□□□ -1.73
CACNA1SQ13698 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.24□□□□□ -1.73
CACNA1SQ13698 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.24□□□□□ -1.73
CACNA1SQ13698 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms