Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
CDH4P55283 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CDH4P55283 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH4P55283 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CDH4P55283 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDH4P55283 XIAPP3-201ENST00000312918 795 ntBASIC3.96□□□□□ -1.78
CDH4P55283 U3.15-201ENST00000365398 212 ntBASIC3.96□□□□□ -1.78
CDH4P55283 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH4P55283 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH4P55283 MIR142-201ENST00000384835 87 ntBASIC3.96□□□□□ -1.78
CDH4P55283 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH4P55283 RN7SKP159-201ENST00000410657 292 ntBASIC3.96□□□□□ -1.78
CDH4P55283 RNA5SP306-201ENST00000411087 107 ntBASIC3.96□□□□□ -1.78
CDH4P55283 JKAMPP1-201ENST00000413804 919 ntBASIC3.96□□□□□ -1.78
CDH4P55283 AC004022.2-201ENST00000413824 193 ntBASIC3.96□□□□□ -1.78
CDH4P55283 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH4P55283 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH4P55283 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH4P55283 Z74696.2-201ENST00000436514 498 ntBASIC3.96□□□□□ -1.78
CDH4P55283 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH4P55283 AC105402.2-201ENST00000438503 358 ntBASIC3.96□□□□□ -1.78
CDH4P55283 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH4P55283 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH4P55283 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH4P55283 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH4P55283 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.96□□□□□ -1.78
CDH4P55283 RPS20P21-201ENST00000466859 343 ntBASIC3.96□□□□□ -1.78
CDH4P55283 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH4P55283 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH4P55283 AC026726.1-201ENST00000512859 601 ntBASIC3.96□□□□□ -1.78
CDH4P55283 MTND4LP31-201ENST00000514859 294 ntBASIC3.96□□□□□ -1.78
CDH4P55283 RNU6-352P-201ENST00000516908 107 ntBASIC3.96□□□□□ -1.78
CDH4P55283 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH4P55283 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH4P55283 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH4P55283 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH4P55283 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH4P55283 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH4P55283 AC107982.3-201ENST00000584957 985 ntBASIC3.96□□□□□ -1.78
CDH4P55283 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CDH4P55283 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH4P55283 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH4P55283 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CDH4P55283 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDH4P55283 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH4P55283 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CDH4P55283 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH4P55283 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH4P55283 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH4P55283 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH4P55283 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH4P55283 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH4P55283 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.95□□□□□ -1.78
CDH4P55283 RPL36AP36-201ENST00000418616 301 ntBASIC3.95□□□□□ -1.78
CDH4P55283 RPL7P53-201ENST00000421245 739 ntBASIC3.95□□□□□ -1.78
CDH4P55283 AC087650.1-201ENST00000431445 468 ntBASIC3.95□□□□□ -1.78
CDH4P55283 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH4P55283 EXTL2P1-201ENST00000446218 416 ntBASIC3.95□□□□□ -1.78
CDH4P55283 AL359073.1-201ENST00000448036 403 ntBASIC3.95□□□□□ -1.78
CDH4P55283 SNRPGP5-201ENST00000456003 220 ntBASIC3.95□□□□□ -1.78
CDH4P55283 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH4P55283 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH4P55283 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH4P55283 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDH4P55283 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH4P55283 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH4P55283 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH4P55283 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH4P55283 AC009101.1-201ENST00000568135 242 ntBASIC3.95□□□□□ -1.78
CDH4P55283 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH4P55283 CBX3P2-202ENST00000583365 535 ntBASIC3.95□□□□□ -1.78
CDH4P55283 AC005242.1-201ENST00000585658 438 ntBASIC3.95□□□□□ -1.78
CDH4P55283 AL109618.2-201ENST00000605527 211 ntBASIC3.95□□□□□ -1.78
CDH4P55283 AC005344.1-201ENST00000613391 459 ntBASIC3.95□□□□□ -1.78
CDH4P55283 MIR4727-201ENST00000622232 55 ntBASIC3.95□□□□□ -1.78
CDH4P55283 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH4P55283 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDH4P55283 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
CDH4P55283 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH4P55283 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH4P55283 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH4P55283 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDH4P55283 AP004289.2-201ENST00000444413 1457 ntBASIC3.94□□□□□ -1.78
CDH4P55283 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH4P55283 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH4P55283 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CDH4P55283 AC025750.1-201ENST00000399891 379 ntBASIC3.94□□□□□ -1.78
CDH4P55283 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDH4P55283 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.94□□□□□ -1.78
CDH4P55283 RN7SKP156-201ENST00000410308 342 ntBASIC3.94□□□□□ -1.78
CDH4P55283 RN7SKP202-201ENST00000410439 330 ntBASIC3.94□□□□□ -1.78
CDH4P55283 RN7SKP177-201ENST00000410567 355 ntBASIC3.94□□□□□ -1.78
CDH4P55283 RNA5SP39-201ENST00000411245 120 ntBASIC3.94□□□□□ -1.78
CDH4P55283 AMD1P2-201ENST00000412936 992 ntBASIC3.94□□□□□ -1.78
CDH4P55283 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH4P55283 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.94□□□□□ -1.78
CDH4P55283 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH4P55283 AL035458.1-201ENST00000433096 585 ntBASIC3.94□□□□□ -1.78
CDH4P55283 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.94□□□□□ -1.78
CDH4P55283 AL353093.1-201ENST00000441292 436 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms