Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.22□□□□□ -1.41
RNF144AP50876 POLHP1-201ENST00000411806 470 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.22□□□□□ -1.41
RNF144AP50876 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF144AP50876 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF144AP50876 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.22□□□□□ -1.41
RNF144AP50876 AL161742.1-201ENST00000418154 584 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 RPS17P17-201ENST00000419392 409 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF144AP50876 EIF4EP1-201ENST00000422311 642 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 AC009362.1-201ENST00000427253 406 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 RPL23AP89-201ENST00000439324 255 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.22□□□□□ -1.41
RNF144AP50876 AC019185.1-201ENST00000442718 389 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 RPL21P133-201ENST00000443666 476 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 RPL23AP43-201ENST00000446445 471 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 SLAMF6P1-201ENST00000451067 602 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 RPL7AP71-201ENST00000451120 739 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.22□□□□□ -1.41
RNF144AP50876 RN7SL561P-201ENST00000488553 281 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.22□□□□□ -1.41
RNF144AP50876 AC108471.1-201ENST00000513977 287 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 RNA5SP96-201ENST00000516041 107 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF144AP50876 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.22□□□□□ -1.41
RNF144AP50876 HMGN2P47-201ENST00000559378 272 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 MIR3159-201ENST00000584572 74 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF144AP50876 MIR6128-201ENST00000615528 109 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 MRPL57P3-201ENST00000619218 176 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.22□□□□□ -1.41
RNF144AP50876 OR5M2P-202ENST00000641241 4242 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RNF144AP50876 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RNF144AP50876 AC011460.1-201ENST00000636268 1834 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 AC022905.1-201ENST00000503430 3048 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 AC008627.1-201ENST00000517511 1704 ntBASIC6.22□□□□□ -1.41
RNF144AP50876 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RNF144AP50876 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.21□□□□□ -1.41
RNF144AP50876 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RNF144AP50876 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.21□□□□□ -1.41
RNF144AP50876 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RNF144AP50876 ZNF806-201ENST00000438300 1774 ntBASIC6.21□□□□□ -1.41
RNF144AP50876 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
RNF144AP50876 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
RNF144AP50876 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.21□□□□□ -1.41
RNF144AP50876 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
RNF144AP50876 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RNF144AP50876 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
RNF144AP50876 AC004014.2-201ENST00000623718 5122 ntBASIC6.21□□□□□ -1.41
RNF144AP50876 AL121768.1-201ENST00000613917 2544 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF144AP50876 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RNF144AP50876 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF144AP50876 RN7SKP189-201ENST00000365042 330 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RNF144AP50876 Y_RNA.428-201ENST00000384078 102 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 MIR649-201ENST00000384843 97 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 RNU6-328P-201ENST00000390887 106 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 U3.20-201ENST00000390909 217 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF144AP50876 RPL6P29-201ENST00000414863 865 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF144AP50876 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.21□□□□□ -1.42
RNF144AP50876 HMGB1P9-201ENST00000429856 646 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 SNAP23P1-201ENST00000433229 246 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RNF144AP50876 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF144AP50876 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AC011225.1-201ENST00000457751 369 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 RPS26P11-201ENST00000463445 348 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AC023194.2-201ENST00000465398 406 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 RPS26P6-201ENST00000475156 348 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 SIAH1P1-201ENST00000479411 923 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AC104109.1-201ENST00000498563 436 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF144AP50876 AC008526.1-201ENST00000509149 338 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 RNU6-470P-201ENST00000515954 104 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 SNORD116.3-201ENST00000517176 78 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF144AP50876 IGHV3-57-201ENST00000520143 280 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF144AP50876 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF144AP50876 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.21□□□□□ -1.42
RNF144AP50876 HMGB1P42-201ENST00000532126 553 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AL137161.1-201ENST00000532231 390 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC6.21□□□□□ -1.42
RNF144AP50876 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF144AP50876 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF144AP50876 LSM6P2-201ENST00000552208 177 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.21□□□□□ -1.42
RNF144AP50876 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.21□□□□□ -1.42
RNF144AP50876 AC027796.1-201ENST00000575593 512 ntBASIC6.21□□□□□ -1.42
RNF144AP50876 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms