Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD4P46934 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD4P46934 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD4P46934 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NEDD4P46934 RNU4-74P-201ENST00000411280 161 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.41□□□□□ -1.7
NEDD4P46934 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 NDUFB1P1-201ENST00000435191 180 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.41□□□□□ -1.7
NEDD4P46934 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.41□□□□□ -1.7
NEDD4P46934 SETD6P1-201ENST00000444575 317 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD4P46934 MOB1AP2-201ENST00000446060 614 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 RPL7L1P1-201ENST00000448259 785 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 AC037198.2-201ENST00000478845 733 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD4P46934 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD4P46934 RNA5SP164-201ENST00000516533 110 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 AC023632.4-201ENST00000517783 191 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD4P46934 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD4P46934 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.41□□□□□ -1.7
NEDD4P46934 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD4P46934 AC106785.3-201ENST00000564064 847 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 AL133457.1-201ENST00000564251 987 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.41□□□□□ -1.7
NEDD4P46934 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD4P46934 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.41□□□□□ -1.7
NEDD4P46934 MIR5187-201ENST00000583479 76 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.41□□□□□ -1.7
NEDD4P46934 AC020914.4-201ENST00000597690 277 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 MTATP6P2-201ENST00000603319 678 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 AL049634.3-201ENST00000604968 457 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.41□□□□□ -1.7
NEDD4P46934 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.41□□□□□ -1.7
NEDD4P46934 AC103858.2-201ENST00000621471 543 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 AC074140.1-201ENST00000621617 208 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 AC106858.1-201ENST00000637497 429 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 AC119674.1-212ENST00000641155 993 ntBASIC4.41□□□□□ -1.7
NEDD4P46934 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NEDD4P46934 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NEDD4P46934 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NEDD4P46934 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.4□□□□□ -1.7
NEDD4P46934 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
NEDD4P46934 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NEDD4P46934 ASNSP1-204ENST00000641977 1664 ntBASIC4.4□□□□□ -1.7
NEDD4P46934 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NEDD4P46934 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.4□□□□□ -1.7
NEDD4P46934 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.4□□□□□ -1.7
NEDD4P46934 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
NEDD4P46934 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
NEDD4P46934 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NEDD4P46934 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.4□□□□□ -1.71
NEDD4P46934 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.4□□□□□ -1.71
NEDD4P46934 AC083899.2-201ENST00000423285 1376 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.4□□□□□ -1.71
NEDD4P46934 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
NEDD4P46934 LINC00561-201ENST00000565815 2738 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NEDD4P46934 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NEDD4P46934 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEDD4P46934 MIR554-201ENST00000384874 96 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 AL590704.1-201ENST00000402856 794 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 AC233289.1-201ENST00000403700 508 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 AL034374.1-201ENST00000406329 351 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEDD4P46934 RNU2-17P-201ENST00000410290 190 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 OR5AW1P-201ENST00000426334 1006 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 AL035246.1-201ENST00000433554 1255 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 AL645931.1-201ENST00000439737 410 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 MTCYBP21-201ENST00000443300 1113 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.4□□□□□ -1.71
NEDD4P46934 HMGB1P16-201ENST00000447155 540 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 AC098824.1-201ENST00000453565 980 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.4□□□□□ -1.71
NEDD4P46934 ACTR3P3-201ENST00000480448 893 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 CDH12P2-201ENST00000504393 298 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 MTND3P3-201ENST00000505004 126 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 SUMO2P20-201ENST00000520803 283 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.4□□□□□ -1.71
NEDD4P46934 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.4□□□□□ -1.71
NEDD4P46934 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.4□□□□□ -1.71
NEDD4P46934 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.4□□□□□ -1.71
NEDD4P46934 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.4□□□□□ -1.71
NEDD4P46934 AC079880.2-201ENST00000603790 1213 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 AC006213.4-201ENST00000616184 634 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 AC012442.3-202ENST00000636742 206 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 AC119674.1-207ENST00000641355 633 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
NEDD4P46934 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEDD4P46934 NCAPGP1-201ENST00000505112 1814 ntBASIC4.4□□□□□ -1.71
NEDD4P46934 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NEDD4P46934 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NEDD4P46934 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NEDD4P46934 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NEDD4P46934 RNA5SP424-201ENST00000390988 115 ntBASIC4.39□□□□□ -1.71
NEDD4P46934 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.39□□□□□ -1.71
NEDD4P46934 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.39□□□□□ -1.71
NEDD4P46934 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NEDD4P46934 RPS6P14-201ENST00000425165 719 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms