Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC093227.2-201ENST00000589357 285 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC13P31276 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXC13P31276 AC016542.1-201ENST00000608259 493 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC13P31276 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXC13P31276 AC017104.5-201ENST00000637647 639 ntBASIC4.56□□□□□ -1.68
HOXC13P31276 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HOXC13P31276 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC13P31276 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC13P31276 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC13P31276 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC13P31276 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXC13P31276 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXC13P31276 MAPK10-303ENST00000641324 3959 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC13P31276 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HOXC13P31276 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXC13P31276 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC13P31276 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HOXC13P31276 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HOXC13P31276 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC13P31276 OR5P1P-201ENST00000299512 925 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 MIR208A-201ENST00000362287 71 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 RNU1-94P-201ENST00000362627 173 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 RNU6-1339P-201ENST00000363574 91 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 MIR525-201ENST00000384978 85 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HOXC13P31276 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC13P31276 BX664727.1-201ENST00000416024 466 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 RPL7P53-201ENST00000421245 739 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 MTCO2P1-201ENST00000424648 477 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 AL451062.2-201ENST00000427515 271 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC13P31276 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXC13P31276 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC13P31276 RPL23AP33-201ENST00000442301 452 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 BX276092.4-201ENST00000452056 248 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 AL121877.1-201ENST00000453704 622 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 RPS27AP17-201ENST00000463344 455 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 AC078817.1-201ENST00000492623 435 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXC13P31276 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC13P31276 RNA5SP309-201ENST00000516670 106 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC13P31276 MTND1P6-201ENST00000523621 946 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.55□□□□□ -1.68
HOXC13P31276 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
HOXC13P31276 OR8R1P-201ENST00000543943 764 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC13P31276 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.55□□□□□ -1.68
HOXC13P31276 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
HOXC13P31276 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC13P31276 MTATP6P2-201ENST00000603319 678 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 AC120053.1-201ENST00000607706 736 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 AC099676.1-201ENST00000608886 657 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 AC112503.2-201ENST00000609005 552 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 MIR6867-201ENST00000610636 67 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 AL669942.2-201ENST00000620352 697 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 AL356863.1-201ENST00000623378 1080 ntBASIC4.55□□□□□ -1.68
HOXC13P31276 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.55□□□□□ -1.68
HOXC13P31276 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HOXC13P31276 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC13P31276 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC13P31276 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC13P31276 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HOXC13P31276 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.55□□□□□ -1.68
HOXC13P31276 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HOXC13P31276 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC13P31276 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC13P31276 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC13P31276 MARK2P15-201ENST00000432204 2186 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXC13P31276 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC13P31276 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.54□□□□□ -1.68
HOXC13P31276 AC106871.1-201ENST00000568324 3102 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC13P31276 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC13P31276 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC13P31276 RNA5SP22-201ENST00000365393 109 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
HOXC13P31276 AL161909.1-201ENST00000397390 712 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 AL022722.2-201ENST00000402519 180 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXC13P31276 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXC13P31276 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC13P31276 RPEP2-201ENST00000432149 701 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.54□□□□□ -1.68
HOXC13P31276 RPL23AP52-201ENST00000439311 478 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC13P31276 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC13P31276 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC13P31276 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXC13P31276 AC126121.1-201ENST00000482313 553 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 TPT1P3-201ENST00000492841 512 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC13P31276 MTCO1P30-201ENST00000515244 580 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 RNA5SP143-201ENST00000516936 115 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 OR4C2P-201ENST00000530855 1064 ntBASIC4.54□□□□□ -1.68
HOXC13P31276 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms