Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC091826.1-201ENST00000514065 313 ntBASIC3.99□□□□□ -1.77
COL4A5P29400 KCTD9P6-201ENST00000522306 950 ntBASIC3.99□□□□□ -1.77
COL4A5P29400 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.99□□□□□ -1.77
COL4A5P29400 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A5P29400 AL133457.1-201ENST00000564251 987 ntBASIC3.99□□□□□ -1.77
COL4A5P29400 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC3.99□□□□□ -1.77
COL4A5P29400 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.99□□□□□ -1.77
COL4A5P29400 AC006946.3-201ENST00000609791 756 ntBASIC3.99□□□□□ -1.77
COL4A5P29400 AC007998.5-201ENST00000622938 237 ntBASIC3.99□□□□□ -1.77
COL4A5P29400 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A5P29400 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A5P29400 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.99□□□□□ -1.77
COL4A5P29400 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL4A5P29400 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
COL4A5P29400 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
COL4A5P29400 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A5P29400 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.98□□□□□ -1.77
COL4A5P29400 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A5P29400 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A5P29400 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A5P29400 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A5P29400 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.98□□□□□ -1.77
COL4A5P29400 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.98□□□□□ -1.77
COL4A5P29400 HMGB1P5-202ENST00000451497 985 ntBASIC3.98□□□□□ -1.77
COL4A5P29400 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC3.98□□□□□ -1.77
COL4A5P29400 HMGB3P14-201ENST00000494195 599 ntBASIC3.98□□□□□ -1.77
COL4A5P29400 APOOP4-201ENST00000513530 597 ntBASIC3.98□□□□□ -1.77
COL4A5P29400 HIGD1AP3-201ENST00000515857 278 ntBASIC3.98□□□□□ -1.77
COL4A5P29400 RNA5SP356-201ENST00000515972 94 ntBASIC3.98□□□□□ -1.77
COL4A5P29400 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.98□□□□□ -1.77
COL4A5P29400 OR5AP1P-201ENST00000529730 940 ntBASIC3.98□□□□□ -1.77
COL4A5P29400 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.98□□□□□ -1.77
COL4A5P29400 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A5P29400 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.98□□□□□ -1.77
COL4A5P29400 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.98□□□□□ -1.77
COL4A5P29400 IGHV3-29-201ENST00000604817 344 ntBASIC3.98□□□□□ -1.77
COL4A5P29400 AC013412.1-201ENST00000610687 192 ntBASIC3.98□□□□□ -1.77
COL4A5P29400 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.98□□□□□ -1.77
COL4A5P29400 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.98□□□□□ -1.77
COL4A5P29400 AL158062.1-201ENST00000619632 745 ntBASIC3.98□□□□□ -1.77
COL4A5P29400 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.98□□□□□ -1.77
COL4A5P29400 AC018692.3-201ENST00000623929 123 ntBASIC3.98□□□□□ -1.77
COL4A5P29400 AL137790.1-201ENST00000634283 177 ntBASIC3.98□□□□□ -1.77
COL4A5P29400 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A5P29400 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A5P29400 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
COL4A5P29400 AC139713.2-215ENST00000641428 5037 ntBASIC3.98□□□□□ -1.77
COL4A5P29400 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A5P29400 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL4A5P29400 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
COL4A5P29400 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
COL4A5P29400 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.97□□□□□ -1.77
COL4A5P29400 SNORA7.4-201ENST00000384249 137 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 AC000041.1-201ENST00000439655 175 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 YWHAQP9-201ENST00000445891 512 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 BTF3L4P4-201ENST00000506381 449 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.97□□□□□ -1.77
COL4A5P29400 AC093524.1-201ENST00000564266 1094 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 UBL5P2-201ENST00000583788 219 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 AL390838.2-201ENST00000602394 274 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 AC006557.5-201ENST00000603126 811 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.97□□□□□ -1.77
COL4A5P29400 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC3.97□□□□□ -1.77
COL4A5P29400 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.97□□□□□ -1.77
COL4A5P29400 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.97□□□□□ -1.77
COL4A5P29400 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL4A5P29400 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL4A5P29400 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
COL4A5P29400 AC011503.2-201ENST00000594230 1500 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL4A5P29400 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL4A5P29400 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL4A5P29400 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL4A5P29400 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL4A5P29400 AC007899.1-201ENST00000412776 775 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 RPS26P47-201ENST00000427219 348 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.97□□□□□ -1.77
COL4A5P29400 CCDC75P1-201ENST00000469247 791 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 RPS26P3-201ENST00000470205 348 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.97□□□□□ -1.77
COL4A5P29400 AC004057.1-201ENST00000485827 348 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 RNU6ATAC39P-201ENST00000516309 149 ntBASIC3.97□□□□□ -1.77
COL4A5P29400 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.97□□□□□ -1.77
COL4A5P29400 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.97□□□□□ -1.77
COL4A5P29400 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL4A5P29400 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
COL4A5P29400 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
COL4A5P29400 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
COL4A5P29400 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.96□□□□□ -1.77
COL4A5P29400 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
COL4A5P29400 AC068647.1-201ENST00000489539 2265 ntBASIC3.96□□□□□ -1.78
COL4A5P29400 TCP1P3-201ENST00000414406 1498 ntBASIC3.96□□□□□ -1.78
COL4A5P29400 CR383658.2-201ENST00000547576 1525 ntBASIC3.96□□□□□ -1.78
COL4A5P29400 HSPE1P8-201ENST00000406997 288 ntBASIC3.96□□□□□ -1.78
COL4A5P29400 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A5P29400 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.96□□□□□ -1.78
COL4A5P29400 AC139783.2-201ENST00000504847 1145 ntBASIC3.96□□□□□ -1.78
COL4A5P29400 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.96□□□□□ -1.78
COL4A5P29400 IGHV3-63-201ENST00000518422 341 ntBASIC3.96□□□□□ -1.78
COL4A5P29400 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms