Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.83□□□□□ -1.8
SHC1P29353 AL161729.3-201ENST00000603533 673 ntBASIC3.83□□□□□ -1.8
SHC1P29353 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.83□□□□□ -1.8
SHC1P29353 AC116447.1-201ENST00000613153 453 ntBASIC3.83□□□□□ -1.8
SHC1P29353 AL445567.2-201ENST00000618935 498 ntBASIC3.83□□□□□ -1.8
SHC1P29353 AC022079.2-201ENST00000619739 566 ntBASIC3.83□□□□□ -1.8
SHC1P29353 MIR6830-201ENST00000636015 70 ntBASIC3.83□□□□□ -1.8
SHC1P29353 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.83□□□□□ -1.8
SHC1P29353 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHC1P29353 AC012321.1-201ENST00000561622 1588 ntBASIC3.83□□□□□ -1.8
SHC1P29353 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHC1P29353 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SHC1P29353 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.83□□□□□ -1.8
SHC1P29353 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SHC1P29353 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 AC009229.4-201ENST00000623854 1947 ntBASIC3.82□□□□□ -1.8
SHC1P29353 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.82□□□□□ -1.8
SHC1P29353 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.82□□□□□ -1.8
SHC1P29353 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.82□□□□□ -1.8
SHC1P29353 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SHC1P29353 MIR383-201ENST00000362257 73 ntBASIC3.82□□□□□ -1.8
SHC1P29353 RNU5B-1-201ENST00000363286 116 ntBASIC3.82□□□□□ -1.8
SHC1P29353 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 MTCO2P31-201ENST00000402702 684 ntBASIC3.82□□□□□ -1.8
SHC1P29353 RPL23AP48-201ENST00000406913 488 ntBASIC3.82□□□□□ -1.8
SHC1P29353 EIF4A1P3-201ENST00000411521 244 ntBASIC3.82□□□□□ -1.8
SHC1P29353 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.82□□□□□ -1.8
SHC1P29353 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.82□□□□□ -1.8
SHC1P29353 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.82□□□□□ -1.8
SHC1P29353 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.82□□□□□ -1.8
SHC1P29353 USP9YP21-201ENST00000420603 432 ntBASIC3.82□□□□□ -1.8
SHC1P29353 NIPA2P1-201ENST00000426223 976 ntBASIC3.82□□□□□ -1.8
SHC1P29353 USP9YP24-201ENST00000434374 697 ntBASIC3.82□□□□□ -1.8
SHC1P29353 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.82□□□□□ -1.8
SHC1P29353 MTND2P22-201ENST00000444325 1033 ntBASIC3.82□□□□□ -1.8
SHC1P29353 USP9YP17-201ENST00000444617 696 ntBASIC3.82□□□□□ -1.8
SHC1P29353 AL096803.2-201ENST00000450032 677 ntBASIC3.82□□□□□ -1.8
SHC1P29353 RPL23AP81-201ENST00000455252 467 ntBASIC3.82□□□□□ -1.8
SHC1P29353 UQCRHP4-201ENST00000471686 272 ntBASIC3.82□□□□□ -1.8
SHC1P29353 AC105137.1-201ENST00000484355 562 ntBASIC3.82□□□□□ -1.8
SHC1P29353 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.82□□□□□ -1.8
SHC1P29353 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.82□□□□□ -1.8
SHC1P29353 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.82□□□□□ -1.8
SHC1P29353 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.82□□□□□ -1.8
SHC1P29353 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.82□□□□□ -1.8
SHC1P29353 MRPS36P5-201ENST00000551909 298 ntBASIC3.82□□□□□ -1.8
SHC1P29353 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.82□□□□□ -1.8
SHC1P29353 AC009097.3-201ENST00000563557 1018 ntBASIC3.82□□□□□ -1.8
SHC1P29353 AC023824.3-201ENST00000569003 562 ntBASIC3.82□□□□□ -1.8
SHC1P29353 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.82□□□□□ -1.8
SHC1P29353 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.82□□□□□ -1.8
SHC1P29353 BNIP3P24-201ENST00000593398 557 ntBASIC3.82□□□□□ -1.8
SHC1P29353 IPO5P1-202ENST00000600039 287 ntBASIC3.82□□□□□ -1.8
SHC1P29353 AC113368.1-201ENST00000603736 382 ntBASIC3.82□□□□□ -1.8
SHC1P29353 Z82195.1-201ENST00000604558 398 ntBASIC3.82□□□□□ -1.8
SHC1P29353 MIR6798-201ENST00000612887 67 ntBASIC3.82□□□□□ -1.8
SHC1P29353 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.82□□□□□ -1.8
SHC1P29353 AC021755.4-201ENST00000616620 456 ntBASIC3.82□□□□□ -1.8
SHC1P29353 AC009704.2-201ENST00000618739 483 ntBASIC3.82□□□□□ -1.8
SHC1P29353 AC104985.3-201ENST00000623479 597 ntBASIC3.82□□□□□ -1.8
SHC1P29353 AC008785.1-201ENST00000624475 456 ntBASIC3.82□□□□□ -1.8
SHC1P29353 MIR3653-201ENST00000625572 110 ntBASIC3.82□□□□□ -1.8
SHC1P29353 AC119674.1-212ENST00000641155 993 ntBASIC3.82□□□□□ -1.8
SHC1P29353 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SHC1P29353 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SHC1P29353 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SHC1P29353 AC018555.1-201ENST00000567548 1980 ntBASIC3.82□□□□□ -1.8
SHC1P29353 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.82□□□□□ -1.8
SHC1P29353 AC006971.1-201ENST00000407916 4486 ntBASIC3.82□□□□□ -1.8
SHC1P29353 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHC1P29353 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.81□□□□□ -1.8
SHC1P29353 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHC1P29353 LARP1BP1-201ENST00000506036 1359 ntBASIC3.81□□□□□ -1.8
SHC1P29353 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHC1P29353 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHC1P29353 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SHC1P29353 SNORA62-201ENST00000365493 153 ntBASIC3.81□□□□□ -1.8
SHC1P29353 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.81□□□□□ -1.8
SHC1P29353 RNY3P9-201ENST00000384727 106 ntBASIC3.81□□□□□ -1.8
SHC1P29353 MIR513B-201ENST00000385136 84 ntBASIC3.81□□□□□ -1.8
SHC1P29353 MIR320B1-201ENST00000390209 79 ntBASIC3.81□□□□□ -1.8
SHC1P29353 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SHC1P29353 HMGB1P10-201ENST00000395823 563 ntBASIC3.81□□□□□ -1.8
SHC1P29353 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHC1P29353 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.81□□□□□ -1.8
SHC1P29353 RNU6-603P-201ENST00000411403 107 ntBASIC3.81□□□□□ -1.8
SHC1P29353 AC010385.1-201ENST00000412374 256 ntBASIC3.81□□□□□ -1.8
SHC1P29353 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.81□□□□□ -1.8
SHC1P29353 LIPT1P1-201ENST00000415870 1186 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms