Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AL031595.2-201ENST00000624215 19071 ntBASIC5.85□□□□□ -1.47
ATF3P18847 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
ATF3P18847 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.85□□□□□ -1.47
ATF3P18847 AL512646.1-201ENST00000269395 1077 ntBASIC5.85□□□□□ -1.47
ATF3P18847 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATF3P18847 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.85□□□□□ -1.47
ATF3P18847 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATF3P18847 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATF3P18847 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATF3P18847 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ATF3P18847 RNU6-213P-201ENST00000384051 104 ntBASIC5.85□□□□□ -1.47
ATF3P18847 SNORA57.3-201ENST00000411095 141 ntBASIC5.85□□□□□ -1.47
ATF3P18847 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.85□□□□□ -1.47
ATF3P18847 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.85□□□□□ -1.47
ATF3P18847 AC092648.1-201ENST00000425870 423 ntBASIC5.85□□□□□ -1.47
ATF3P18847 C1DP1-201ENST00000426049 402 ntBASIC5.85□□□□□ -1.47
ATF3P18847 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.85□□□□□ -1.47
ATF3P18847 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.85□□□□□ -1.47
ATF3P18847 PDSS1P2-201ENST00000449397 678 ntBASIC5.85□□□□□ -1.47
ATF3P18847 RPL7P22-201ENST00000466005 733 ntBASIC5.85□□□□□ -1.47
ATF3P18847 AC069528.1-202ENST00000482888 637 ntBASIC5.85□□□□□ -1.47
ATF3P18847 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
ATF3P18847 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATF3P18847 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATF3P18847 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATF3P18847 AC118282.2-201ENST00000508739 374 ntBASIC5.85□□□□□ -1.47
ATF3P18847 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATF3P18847 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.85□□□□□ -1.47
ATF3P18847 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATF3P18847 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.85□□□□□ -1.47
ATF3P18847 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.85□□□□□ -1.47
ATF3P18847 AL442163.2-201ENST00000553912 710 ntBASIC5.85□□□□□ -1.47
ATF3P18847 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATF3P18847 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.85□□□□□ -1.47
ATF3P18847 AC013244.3-201ENST00000605614 388 ntBASIC5.85□□□□□ -1.47
ATF3P18847 AC005858.4-201ENST00000623191 700 ntBASIC5.85□□□□□ -1.47
ATF3P18847 AL109659.3-201ENST00000624985 950 ntBASIC5.85□□□□□ -1.47
ATF3P18847 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.85□□□□□ -1.47
ATF3P18847 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATF3P18847 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.85□□□□□ -1.47
ATF3P18847 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
ATF3P18847 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATF3P18847 AC104623.2-202ENST00000623477 4002 ntBASIC5.84□□□□□ -1.47
ATF3P18847 SGO1P1-201ENST00000603525 1447 ntBASIC5.84□□□□□ -1.47
ATF3P18847 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.84□□□□□ -1.47
ATF3P18847 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.84□□□□□ -1.47
ATF3P18847 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATF3P18847 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
ATF3P18847 MIR16-1-201ENST00000385271 89 ntBASIC5.84□□□□□ -1.47
ATF3P18847 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.84□□□□□ -1.47
ATF3P18847 AC062016.2-201ENST00000420950 676 ntBASIC5.84□□□□□ -1.47
ATF3P18847 AC104333.2-201ENST00000422630 192 ntBASIC5.84□□□□□ -1.47
ATF3P18847 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ATF3P18847 HMGB3P6-201ENST00000444896 598 ntBASIC5.84□□□□□ -1.47
ATF3P18847 AC104978.1-201ENST00000449387 391 ntBASIC5.84□□□□□ -1.47
ATF3P18847 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.84□□□□□ -1.47
ATF3P18847 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.84□□□□□ -1.47
ATF3P18847 SNORA59A-201ENST00000459326 152 ntBASIC5.84□□□□□ -1.47
ATF3P18847 NAP1L1P3-201ENST00000462291 880 ntBASIC5.84□□□□□ -1.47
ATF3P18847 PRDX3P4-201ENST00000470828 747 ntBASIC5.84□□□□□ -1.47
ATF3P18847 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.84□□□□□ -1.47
ATF3P18847 AC026427.2-201ENST00000506228 536 ntBASIC5.84□□□□□ -1.47
ATF3P18847 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.84□□□□□ -1.47
ATF3P18847 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.84□□□□□ -1.47
ATF3P18847 AL352979.3-201ENST00000553515 247 ntBASIC5.84□□□□□ -1.47
ATF3P18847 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.84□□□□□ -1.47
ATF3P18847 BPTFP1-201ENST00000579209 492 ntBASIC5.84□□□□□ -1.47
ATF3P18847 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.84□□□□□ -1.47
ATF3P18847 AL583856.2-201ENST00000606298 543 ntBASIC5.84□□□□□ -1.47
ATF3P18847 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.84□□□□□ -1.47
ATF3P18847 FRG1EP-201ENST00000634469 770 ntBASIC5.84□□□□□ -1.47
ATF3P18847 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.84□□□□□ -1.47
ATF3P18847 AC008013.2-202ENST00000637965 364 ntBASIC5.84□□□□□ -1.47
ATF3P18847 ZNF285B-201ENST00000561698 1767 ntBASIC5.84□□□□□ -1.47
ATF3P18847 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.84□□□□□ -1.47
ATF3P18847 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
ATF3P18847 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.84□□□□□ -1.48
ATF3P18847 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
ATF3P18847 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATF3P18847 AL451142.2-201ENST00000429076 2090 ntBASIC5.83□□□□□ -1.48
ATF3P18847 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ATF3P18847 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.83□□□□□ -1.48
ATF3P18847 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATF3P18847 PTMAP5-201ENST00000393073 333 ntBASIC5.83□□□□□ -1.48
ATF3P18847 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.83□□□□□ -1.48
ATF3P18847 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.83□□□□□ -1.48
ATF3P18847 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.83□□□□□ -1.48
ATF3P18847 AC239809.1-201ENST00000450470 217 ntBASIC5.83□□□□□ -1.48
ATF3P18847 OFD1P3Y-201ENST00000453312 783 ntBASIC5.83□□□□□ -1.48
ATF3P18847 DDX39BP2-208ENST00000453923 258 ntBASIC5.83□□□□□ -1.48
ATF3P18847 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.83□□□□□ -1.48
ATF3P18847 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATF3P18847 RPL7P9-201ENST00000468715 747 ntBASIC5.83□□□□□ -1.48
ATF3P18847 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ATF3P18847 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.83□□□□□ -1.48
ATF3P18847 AC008885.2-201ENST00000509506 930 ntBASIC5.83□□□□□ -1.48
ATF3P18847 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.83□□□□□ -1.48
ATF3P18847 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.83□□□□□ -1.48
ATF3P18847 SMARCE1P4-201ENST00000523647 241 ntBASIC5.83□□□□□ -1.48
ATF3P18847 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms