Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ACTN1P12814 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ACTN1P12814 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ACTN1P12814 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
ACTN1P12814 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
ACTN1P12814 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ACTN1P12814 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
ACTN1P12814 RNA5SP175-201ENST00000364275 119 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 SNORA70.4-201ENST00000365509 134 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 RNU6-298P-201ENST00000390888 96 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ACTN1P12814 MCTS2P-201ENST00000394552 546 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 AL583835.1-201ENST00000399570 407 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 AL590290.1-201ENST00000405336 380 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 RNA5SP146-201ENST00000410743 123 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 RN7SKP33-201ENST00000410942 340 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 AC092638.1-201ENST00000411966 1275 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ACTN1P12814 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 IPMKP1-201ENST00000425988 855 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.74□□□□□ -1.65
ACTN1P12814 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.74□□□□□ -1.65
ACTN1P12814 AL645638.1-201ENST00000440519 361 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 AL162388.1-201ENST00000450912 352 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 AC091564.1-201ENST00000464563 479 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.74□□□□□ -1.65
ACTN1P12814 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.74□□□□□ -1.65
ACTN1P12814 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.74□□□□□ -1.65
ACTN1P12814 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.74□□□□□ -1.65
ACTN1P12814 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.74□□□□□ -1.65
ACTN1P12814 IGKV2-36-201ENST00000519999 223 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 HMGB1P1-201ENST00000522557 636 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.74□□□□□ -1.65
ACTN1P12814 AC023824.3-201ENST00000569003 562 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.74□□□□□ -1.65
ACTN1P12814 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
ACTN1P12814 AC010608.2-201ENST00000624830 470 ntBASIC4.74□□□□□ -1.65
ACTN1P12814 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.74□□□□□ -1.65
ACTN1P12814 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ACTN1P12814 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ACTN1P12814 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
ACTN1P12814 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ACTN1P12814 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ACTN1P12814 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
ACTN1P12814 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ACTN1P12814 AL627171.1-201ENST00000618845 1308 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.73□□□□□ -1.65
ACTN1P12814 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.73□□□□□ -1.65
ACTN1P12814 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ACTN1P12814 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
ACTN1P12814 AC092162.3-201ENST00000624511 1624 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ACTN1P12814 RNU1-14P-201ENST00000362759 152 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 RNU6-984P-201ENST00000363236 109 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 RNA5SP130-201ENST00000364431 114 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 SNORD66.1-201ENST00000391230 76 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 ENSAP1-201ENST00000392855 326 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 DNAJC19P6-201ENST00000401853 280 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 MTATP6P31-201ENST00000406985 692 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.73□□□□□ -1.65
ACTN1P12814 AC092745.2-202ENST00000411880 369 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 MFSD13B-201ENST00000420133 1290 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 RPS24P8-201ENST00000431490 402 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ACTN1P12814 ARF4P4-201ENST00000439608 520 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.73□□□□□ -1.65
ACTN1P12814 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.73□□□□□ -1.65
ACTN1P12814 AC005002.1-201ENST00000447458 540 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 MTND2P8-201ENST00000450555 1025 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 VN1R32P-201ENST00000452234 905 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 DNAJC19P8-201ENST00000452887 259 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.73□□□□□ -1.65
ACTN1P12814 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 RPL7P22-201ENST00000466005 733 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.73□□□□□ -1.65
ACTN1P12814 STMN1P2-201ENST00000508435 439 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.73□□□□□ -1.65
ACTN1P12814 AC099522.1-202ENST00000514718 367 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.73□□□□□ -1.65
ACTN1P12814 AC118942.1-201ENST00000529674 1035 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.73□□□□□ -1.65
ACTN1P12814 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.73□□□□□ -1.65
ACTN1P12814 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.73□□□□□ -1.65
ACTN1P12814 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.73□□□□□ -1.65
ACTN1P12814 HNRNPCP4-201ENST00000571636 900 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.73□□□□□ -1.65
ACTN1P12814 AC115085.1-201ENST00000588924 229 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.73□□□□□ -1.65
ACTN1P12814 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.73□□□□□ -1.65
ACTN1P12814 AP002906.1-201ENST00000603405 233 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 AC090912.3-201ENST00000609775 533 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 AC099669.2-201ENST00000616549 437 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 MIR7154-201ENST00000620673 73 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.73□□□□□ -1.65
ACTN1P12814 AL590396.4-201ENST00000636779 956 ntBASIC4.73□□□□□ -1.65
ACTN1P12814 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.73□□□□□ -1.65
ACTN1P12814 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.73□□□□□ -1.65
ACTN1P12814 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ACTN1P12814 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ACTN1P12814 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms