Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL6A2P12110 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.4□□□□□ -1.55
COL6A2P12110 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
COL6A2P12110 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL6A2P12110 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.4□□□□□ -1.55
COL6A2P12110 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COL6A2P12110 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.39□□□□□ -1.55
COL6A2P12110 AP002001.2-201ENST00000529025 1469 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL6A2P12110 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL6A2P12110 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.39□□□□□ -1.55
COL6A2P12110 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL6A2P12110 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL6A2P12110 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL6A2P12110 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL6A2P12110 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.39□□□□□ -1.55
COL6A2P12110 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 RNU6-657P-201ENST00000383904 107 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 Y_RNA.450-201ENST00000384198 113 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL6A2P12110 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
COL6A2P12110 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL6A2P12110 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.39□□□□□ -1.55
COL6A2P12110 MTCYBP24-201ENST00000420387 1106 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 RPL7P30-201ENST00000420888 709 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.39□□□□□ -1.55
COL6A2P12110 AL513174.1-201ENST00000423182 629 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.39□□□□□ -1.55
COL6A2P12110 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.39□□□□□ -1.55
COL6A2P12110 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL6A2P12110 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 AL589765.3-201ENST00000446084 462 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.39□□□□□ -1.55
COL6A2P12110 Z99127.3-201ENST00000448158 395 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC013267.1-201ENST00000458227 267 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC094085.1-201ENST00000468914 584 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC106872.3-201ENST00000495104 446 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.39□□□□□ -1.55
COL6A2P12110 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.39□□□□□ -1.55
COL6A2P12110 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.39□□□□□ -1.55
COL6A2P12110 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.39□□□□□ -1.55
COL6A2P12110 AC026412.2-201ENST00000512270 1075 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.39□□□□□ -1.55
COL6A2P12110 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.39□□□□□ -1.55
COL6A2P12110 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL6A2P12110 AC013828.2-201ENST00000532487 235 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC027369.5-201ENST00000533838 755 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.39□□□□□ -1.55
COL6A2P12110 ADI1P3-201ENST00000549509 470 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.39□□□□□ -1.55
COL6A2P12110 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.39□□□□□ -1.55
COL6A2P12110 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
COL6A2P12110 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 MIR4637-201ENST00000582405 84 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC009977.1-201ENST00000586015 570 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC006504.3-201ENST00000586818 523 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AL138895.2-201ENST00000603019 178 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 MEMO1P5-201ENST00000604810 406 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AP002360.3-201ENST00000607673 710 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC015982.1-201ENST00000608113 465 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC104458.1-201ENST00000608243 463 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 DUXAP9-208ENST00000622815 614 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC116563.2-201ENST00000624751 535 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 AC011755.1-201ENST00000623763 2049 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL6A2P12110 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL6A2P12110 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL6A2P12110 USP9YP4-201ENST00000424401 1745 ntBASIC5.39□□□□□ -1.55
COL6A2P12110 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.39□□□□□ -1.55
COL6A2P12110 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL6A2P12110 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL6A2P12110 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
COL6A2P12110 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL6A2P12110 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
COL6A2P12110 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL6A2P12110 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL6A2P12110 RN7SKP275-201ENST00000364626 301 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 RNU6-444P-201ENST00000383988 108 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL6A2P12110 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL6A2P12110 DBIP1-201ENST00000401435 260 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 HSPD1P16-201ENST00000402302 394 ntBASIC5.38□□□□□ -1.55
COL6A2P12110 AL078604.1-201ENST00000404609 466 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms