Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.18□□□□□ -1.74
RAB40ALP0C0E4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.18□□□□□ -1.74
RAB40ALP0C0E4 MIR6864-201ENST00000617935 70 ntBASIC4.18□□□□□ -1.74
RAB40ALP0C0E4 AC123767.1-202ENST00000620407 817 ntBASIC4.18□□□□□ -1.74
RAB40ALP0C0E4 RNU6-156P-201ENST00000621869 107 ntBASIC4.18□□□□□ -1.74
RAB40ALP0C0E4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
RAB40ALP0C0E4 ZNF663P-202ENST00000641770 1131 ntBASIC4.18□□□□□ -1.74
RAB40ALP0C0E4 AL049555.1-201ENST00000562834 1933 ntBASIC4.18□□□□□ -1.74
RAB40ALP0C0E4 AL672167.1-203ENST00000641299 2975 ntBASIC4.18□□□□□ -1.74
RAB40ALP0C0E4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RAB40ALP0C0E4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.18□□□□□ -1.74
RAB40ALP0C0E4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RAB40ALP0C0E4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RAB40ALP0C0E4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 RNA5SP28-201ENST00000363841 119 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 MIR1193-201ENST00000408109 78 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 RNU6-584P-201ENST00000410350 95 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 RN7SKP263-201ENST00000411194 309 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 MTCO2P8-201ENST00000412213 658 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 SAGE2P-201ENST00000420011 2126 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 HSFY1P1-201ENST00000423928 1178 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 MTCYBP32-201ENST00000427945 1084 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AC114973.1-201ENST00000429057 632 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 RPS3AP54-201ENST00000435535 734 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AL357520.1-201ENST00000441557 453 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 RPS27AP15-201ENST00000447672 466 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AC104306.1-201ENST00000449702 371 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 MRPL42P4-201ENST00000453267 443 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 RPS15AP1-201ENST00000457423 391 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 GAPDHP39-201ENST00000481866 979 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AC069528.1-202ENST00000482888 637 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 RN7SL812P-201ENST00000493791 279 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 KRT19P6-201ENST00000510983 209 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 RNU6-488P-201ENST00000515918 99 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 MIR2116-201ENST00000517221 80 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 MRPL49P2-201ENST00000521066 465 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 OR10V3P-201ENST00000525712 725 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 OR7E13P-201ENST00000526052 910 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AL445435.1-201ENST00000604232 665 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AC009237.17-201ENST00000618111 748 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 MIR6891-201ENST00000618788 93 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AC140479.6-201ENST00000633535 357 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 AC107081.3-201ENST00000612715 2034 ntBASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RAB40ALP0C0E4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 AC008033.1-201ENST00000216407 1162 ntBASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 AC114495.1-201ENST00000441274 436 ntBASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 RPL7P59-201ENST00000447700 943 ntBASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 RPS27AP17-201ENST00000463344 455 ntBASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 RPL21P71-201ENST00000465598 459 ntBASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 RPL7P19-201ENST00000469948 618 ntBASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 AC012158.1-204ENST00000483430 465 ntBASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 RPL21P131-201ENST00000497298 483 ntBASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RAB40ALP0C0E4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms