Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SETP15-201ENST00000412724 337 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 AC013404.1-201ENST00000413068 249 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 AL157831.1-201ENST00000426134 473 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.6□□□□□ -1.51
SNRPA1P09661 RPS26P2-201ENST00000440331 348 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 AL512326.1-201ENST00000443050 721 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 AC005002.1-201ENST00000447458 540 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNRPA1P09661 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.6□□□□□ -1.51
SNRPA1P09661 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNRPA1P09661 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.6□□□□□ -1.51
SNRPA1P09661 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SNRPA1P09661 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.6□□□□□ -1.51
SNRPA1P09661 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.6□□□□□ -1.51
SNRPA1P09661 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.6□□□□□ -1.51
SNRPA1P09661 RNU6-232P-201ENST00000517144 64 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.6□□□□□ -1.51
SNRPA1P09661 AC023161.2-201ENST00000551218 780 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 NBEAP1-201ENST00000554452 979 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 AC087465.1-201ENST00000560574 245 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 AL031281.1-201ENST00000604049 488 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 AL109618.2-201ENST00000605527 211 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 AP002360.3-201ENST00000607673 710 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 AL021997.2-201ENST00000615674 271 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 MIR8069-1-201ENST00000616627 86 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 MIR8069-2-201ENST00000621412 86 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 AC079248.2-201ENST00000623779 326 ntBASIC5.6□□□□□ -1.51
SNRPA1P09661 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
SNRPA1P09661 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.6□□□□□ -1.51
SNRPA1P09661 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SNRPA1P09661 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.6□□□□□ -1.51
SNRPA1P09661 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SNRPA1P09661 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNRPA1P09661 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNRPA1P09661 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNRPA1P09661 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.59□□□□□ -1.51
SNRPA1P09661 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNRPA1P09661 AC027228.2-201ENST00000567141 2154 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SNRPA1P09661 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNRPA1P09661 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.59□□□□□ -1.51
SNRPA1P09661 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNRPA1P09661 RNU6-543P-201ENST00000362576 108 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 snoZ40.1-201ENST00000364540 72 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 RNU6-157P-201ENST00000383957 107 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 RNU4-31P-201ENST00000384211 141 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 RNU6-452P-201ENST00000384406 107 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 Y_RNA.505-201ENST00000384489 102 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 U3.23-201ENST00000391132 200 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 AC097374.1-203ENST00000400783 485 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.59□□□□□ -1.51
SNRPA1P09661 RPL6P29-201ENST00000414863 865 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 AC006960.1-201ENST00000419980 153 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 AC012519.1-201ENST00000424588 610 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.59□□□□□ -1.51
SNRPA1P09661 COX6CP15-201ENST00000426313 211 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.59□□□□□ -1.51
SNRPA1P09661 BTF3P10-201ENST00000433415 495 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 AL132765.1-201ENST00000434165 553 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 ISCA1P2-201ENST00000438679 421 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.59□□□□□ -1.51
SNRPA1P09661 HMGB1P48-201ENST00000446155 598 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNRPA1P09661 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.59□□□□□ -1.51
SNRPA1P09661 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.59□□□□□ -1.51
SNRPA1P09661 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.59□□□□□ -1.51
SNRPA1P09661 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.59□□□□□ -1.51
SNRPA1P09661 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SNRPA1P09661 TVP23BP1-201ENST00000557500 617 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.59□□□□□ -1.51
SNRPA1P09661 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.59□□□□□ -1.51
SNRPA1P09661 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.59□□□□□ -1.51
SNRPA1P09661 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.59□□□□□ -1.51
SNRPA1P09661 AP001542.2-201ENST00000593141 364 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.59□□□□□ -1.51
SNRPA1P09661 AL161729.3-201ENST00000603533 673 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 AL163642.2-201ENST00000604722 1019 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 AL354984.3-201ENST00000604803 325 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 AL592148.2-201ENST00000612210 372 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SNRPA1P09661 AC091931.1-201ENST00000623488 728 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 AC098679.5-201ENST00000624394 571 ntBASIC5.59□□□□□ -1.51
SNRPA1P09661 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.59□□□□□ -1.51
SNRPA1P09661 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.59□□□□□ -1.51
SNRPA1P09661 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SNRPA1P09661 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
SNRPA1P09661 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SNRPA1P09661 SGO1P2-201ENST00000429458 1589 ntBASIC5.59□□□□□ -1.52
SNRPA1P09661 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNRPA1P09661 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNRPA1P09661 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNRPA1P09661 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.58□□□□□ -1.52
SNRPA1P09661 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNRPA1P09661 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNRPA1P09661 RNA5SP388-201ENST00000362584 119 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 RNU6-623P-201ENST00000363143 105 ntBASIC5.58□□□□□ -1.52
SNRPA1P09661 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms