Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 TRAV31-201ENST00000502780 342 ntBASIC4.09□□□□□ -1.75
TPM1P09493 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.09□□□□□ -1.75
TPM1P09493 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TPM1P09493 MTCO1P30-201ENST00000515244 580 ntBASIC4.09□□□□□ -1.75
TPM1P09493 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.09□□□□□ -1.75
TPM1P09493 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.09□□□□□ -1.75
TPM1P09493 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.09□□□□□ -1.75
TPM1P09493 AC009643.1-201ENST00000532030 391 ntBASIC4.09□□□□□ -1.75
TPM1P09493 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.09□□□□□ -1.75
TPM1P09493 RN7SL600P-201ENST00000581811 299 ntBASIC4.09□□□□□ -1.75
TPM1P09493 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.09□□□□□ -1.75
TPM1P09493 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.09□□□□□ -1.75
TPM1P09493 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.09□□□□□ -1.75
TPM1P09493 HMGB1P51-201ENST00000605166 638 ntBASIC4.09□□□□□ -1.75
TPM1P09493 RNA5SP108-201ENST00000605921 117 ntBASIC4.09□□□□□ -1.75
TPM1P09493 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.09□□□□□ -1.75
TPM1P09493 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TPM1P09493 AC073429.2-201ENST00000569694 1444 ntBASIC4.09□□□□□ -1.75
TPM1P09493 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
TPM1P09493 NMD3P1-201ENST00000439704 1488 ntBASIC4.09□□□□□ -1.75
TPM1P09493 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TPM1P09493 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
TPM1P09493 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TPM1P09493 MFSD8-236ENST00000641509 4050 ntBASIC4.08□□□□□ -1.76
TPM1P09493 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TPM1P09493 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TPM1P09493 RNA5SP130-201ENST00000364431 114 ntBASIC4.08□□□□□ -1.76
TPM1P09493 MIR153-1-201ENST00000384914 90 ntBASIC4.08□□□□□ -1.76
TPM1P09493 AC069218.2-201ENST00000411665 344 ntBASIC4.08□□□□□ -1.76
TPM1P09493 AC004987.3-201ENST00000413879 771 ntBASIC4.08□□□□□ -1.76
TPM1P09493 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.08□□□□□ -1.76
TPM1P09493 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TPM1P09493 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.08□□□□□ -1.76
TPM1P09493 AL356276.2-201ENST00000435919 558 ntBASIC4.08□□□□□ -1.76
TPM1P09493 SETD6P1-201ENST00000444575 317 ntBASIC4.08□□□□□ -1.76
TPM1P09493 HMGN2P21-201ENST00000447764 270 ntBASIC4.08□□□□□ -1.76
TPM1P09493 PPIAP3-201ENST00000450588 505 ntBASIC4.08□□□□□ -1.76
TPM1P09493 RPL23AP62-201ENST00000463396 453 ntBASIC4.08□□□□□ -1.76
TPM1P09493 ZNF542P-204ENST00000482727 1305 ntBASIC4.08□□□□□ -1.76
TPM1P09493 ACTG1P13-201ENST00000486987 1043 ntBASIC4.08□□□□□ -1.76
TPM1P09493 AC007686.1-201ENST00000488511 463 ntBASIC4.08□□□□□ -1.76
TPM1P09493 RPL5P23-201ENST00000496040 868 ntBASIC4.08□□□□□ -1.76
TPM1P09493 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.08□□□□□ -1.76
TPM1P09493 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TPM1P09493 AC108120.2-201ENST00000512973 294 ntBASIC4.08□□□□□ -1.76
TPM1P09493 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.08□□□□□ -1.76
TPM1P09493 RNU6-1004P-201ENST00000516584 111 ntBASIC4.08□□□□□ -1.76
TPM1P09493 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.08□□□□□ -1.76
TPM1P09493 AC022695.1-201ENST00000522089 237 ntBASIC4.08□□□□□ -1.76
TPM1P09493 OR5AP1P-201ENST00000529730 940 ntBASIC4.08□□□□□ -1.76
TPM1P09493 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.08□□□□□ -1.76
TPM1P09493 AC025260.1-201ENST00000548858 430 ntBASIC4.08□□□□□ -1.76
TPM1P09493 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.08□□□□□ -1.76
TPM1P09493 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.08□□□□□ -1.76
TPM1P09493 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TPM1P09493 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.08□□□□□ -1.76
TPM1P09493 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.08□□□□□ -1.76
TPM1P09493 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.08□□□□□ -1.76
TPM1P09493 AC115085.1-201ENST00000588924 229 ntBASIC4.08□□□□□ -1.76
TPM1P09493 AC090525.3-201ENST00000605601 189 ntBASIC4.08□□□□□ -1.76
TPM1P09493 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TPM1P09493 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.08□□□□□ -1.76
TPM1P09493 AC006065.5-201ENST00000623427 349 ntBASIC4.08□□□□□ -1.76
TPM1P09493 AL355480.1-201ENST00000629041 99 ntBASIC4.08□□□□□ -1.76
TPM1P09493 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
TPM1P09493 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.07□□□□□ -1.76
TPM1P09493 AC006042.3-201ENST00000454684 1469 ntBASIC4.07□□□□□ -1.76
TPM1P09493 PTMAP5-201ENST00000393073 333 ntBASIC4.07□□□□□ -1.76
TPM1P09493 OR6C69P-201ENST00000394268 893 ntBASIC4.07□□□□□ -1.76
TPM1P09493 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.07□□□□□ -1.76
TPM1P09493 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TPM1P09493 AL691447.1-201ENST00000419456 387 ntBASIC4.07□□□□□ -1.76
TPM1P09493 AL592293.2-201ENST00000422292 996 ntBASIC4.07□□□□□ -1.76
TPM1P09493 OSTCP5-201ENST00000425293 453 ntBASIC4.07□□□□□ -1.76
TPM1P09493 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TPM1P09493 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.07□□□□□ -1.76
TPM1P09493 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.07□□□□□ -1.76
TPM1P09493 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.07□□□□□ -1.76
TPM1P09493 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.07□□□□□ -1.76
TPM1P09493 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.07□□□□□ -1.76
TPM1P09493 RPS29P22-201ENST00000472363 168 ntBASIC4.07□□□□□ -1.76
TPM1P09493 TRBV8-2-201ENST00000475637 270 ntBASIC4.07□□□□□ -1.76
TPM1P09493 AC092451.1-201ENST00000480211 153 ntBASIC4.07□□□□□ -1.76
TPM1P09493 RPS4XP22-201ENST00000480755 780 ntBASIC4.07□□□□□ -1.76
TPM1P09493 RPS3AP50-201ENST00000487064 803 ntBASIC4.07□□□□□ -1.76
TPM1P09493 AC010285.3-201ENST00000511668 676 ntBASIC4.07□□□□□ -1.76
TPM1P09493 AC093331.1-201ENST00000521474 169 ntBASIC4.07□□□□□ -1.76
TPM1P09493 AP001636.2-201ENST00000525517 696 ntBASIC4.07□□□□□ -1.76
TPM1P09493 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.07□□□□□ -1.76
TPM1P09493 AC006254.3-201ENST00000603353 884 ntBASIC4.07□□□□□ -1.76
TPM1P09493 AC090506.2-201ENST00000624521 419 ntBASIC4.07□□□□□ -1.76
TPM1P09493 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.07□□□□□ -1.76
TPM1P09493 AL732372.2-225ENST00000642124 456 ntBASIC4.07□□□□□ -1.76
TPM1P09493 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TPM1P09493 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TPM1P09493 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TPM1P09493 GABPAP-201ENST00000419271 1356 ntBASIC4.06□□□□□ -1.76
TPM1P09493 ZNF33CP-201ENST00000432492 2030 ntBASIC4.06□□□□□ -1.76
TPM1P09493 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TPM1P09493 RNU6-386P-201ENST00000362650 107 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms