Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4□□□□□ -1.77
RETP07949 TPTE2P3-201ENST00000441562 1189 ntBASIC4□□□□□ -1.77
RETP07949 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4□□□□□ -1.77
RETP07949 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4□□□□□ -1.77
RETP07949 HMGB3P22-202ENST00000451823 572 ntBASIC4□□□□□ -1.77
RETP07949 AC069277.2-201ENST00000454211 432 ntBASIC4□□□□□ -1.77
RETP07949 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4□□□□□ -1.77
RETP07949 AC092691.2-201ENST00000461787 803 ntBASIC4□□□□□ -1.77
RETP07949 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4□□□□□ -1.77
RETP07949 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4□□□□□ -1.77
RETP07949 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4□□□□□ -1.77
RETP07949 AC119751.5-201ENST00000514077 770 ntBASIC4□□□□□ -1.77
RETP07949 MIR2114-201ENST00000516645 80 ntBASIC4□□□□□ -1.77
RETP07949 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4□□□□□ -1.77
RETP07949 AC091516.1-201ENST00000549191 703 ntBASIC4□□□□□ -1.77
RETP07949 AC027176.2-201ENST00000559166 746 ntBASIC4□□□□□ -1.77
RETP07949 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4□□□□□ -1.77
RETP07949 AC244505.7-201ENST00000599675 272 ntBASIC4□□□□□ -1.77
RETP07949 AC015726.1-201ENST00000602353 681 ntBASIC4□□□□□ -1.77
RETP07949 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4□□□□□ -1.77
RETP07949 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4□□□□□ -1.77
RETP07949 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4□□□□□ -1.77
RETP07949 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4□□□□□ -1.77
RETP07949 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4□□□□□ -1.77
RETP07949 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4□□□□□ -1.77
RETP07949 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RETP07949 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4□□□□□ -1.77
RETP07949 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RETP07949 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
RETP07949 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RETP07949 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.99□□□□□ -1.77
RETP07949 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.99□□□□□ -1.77
RETP07949 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.99□□□□□ -1.77
RETP07949 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RETP07949 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
RETP07949 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.99□□□□□ -1.77
RETP07949 OR52E6-202ENST00000379946 954 ntBASIC3.99□□□□□ -1.77
RETP07949 OR4K6P-201ENST00000416478 897 ntBASIC3.99□□□□□ -1.77
RETP07949 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.99□□□□□ -1.77
RETP07949 AL353093.1-201ENST00000441292 436 ntBASIC3.99□□□□□ -1.77
RETP07949 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.99□□□□□ -1.77
RETP07949 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.99□□□□□ -1.77
RETP07949 FTH1P25-201ENST00000447665 469 ntBASIC3.99□□□□□ -1.77
RETP07949 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.99□□□□□ -1.77
RETP07949 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.99□□□□□ -1.77
RETP07949 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.99□□□□□ -1.77
RETP07949 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RETP07949 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.99□□□□□ -1.77
RETP07949 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.99□□□□□ -1.77
RETP07949 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.99□□□□□ -1.77
RETP07949 AL049634.3-201ENST00000604968 457 ntBASIC3.99□□□□□ -1.77
RETP07949 SCARNA15.3-201ENST00000626315 122 ntBASIC3.99□□□□□ -1.77
RETP07949 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.99□□□□□ -1.77
RETP07949 SCARNA4.1-201ENST00000628597 123 ntBASIC3.99□□□□□ -1.77
RETP07949 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RETP07949 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.99□□□□□ -1.77
RETP07949 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RETP07949 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RETP07949 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.99□□□□□ -1.77
RETP07949 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RETP07949 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RETP07949 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RETP07949 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RETP07949 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RETP07949 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RETP07949 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.98□□□□□ -1.77
RETP07949 RNA5SP97-201ENST00000365006 84 ntBASIC3.98□□□□□ -1.77
RETP07949 RNU6-225P-201ENST00000384613 103 ntBASIC3.98□□□□□ -1.77
RETP07949 ZNF603P-201ENST00000405613 487 ntBASIC3.98□□□□□ -1.77
RETP07949 MTND2P15-201ENST00000418575 892 ntBASIC3.98□□□□□ -1.77
RETP07949 AL159169.1-201ENST00000421119 127 ntBASIC3.98□□□□□ -1.77
RETP07949 USP9YP7-201ENST00000436723 430 ntBASIC3.98□□□□□ -1.77
RETP07949 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.98□□□□□ -1.77
RETP07949 PPIAP3-201ENST00000450588 505 ntBASIC3.98□□□□□ -1.77
RETP07949 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.98□□□□□ -1.77
RETP07949 USP9YP32-201ENST00000452432 430 ntBASIC3.98□□□□□ -1.77
RETP07949 RPL29P14-201ENST00000495837 428 ntBASIC3.98□□□□□ -1.77
RETP07949 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RETP07949 UBE2CP3-201ENST00000502715 450 ntBASIC3.98□□□□□ -1.77
RETP07949 CDH12P2-201ENST00000504393 298 ntBASIC3.98□□□□□ -1.77
RETP07949 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.98□□□□□ -1.77
RETP07949 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.98□□□□□ -1.77
RETP07949 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.98□□□□□ -1.77
RETP07949 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RETP07949 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.98□□□□□ -1.77
RETP07949 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RETP07949 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.98□□□□□ -1.77
RETP07949 AC063950.1-201ENST00000552036 308 ntBASIC3.98□□□□□ -1.77
RETP07949 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RETP07949 AL360157.1-201ENST00000565962 87 ntBASIC3.98□□□□□ -1.77
RETP07949 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.98□□□□□ -1.77
RETP07949 AC087499.8-201ENST00000578406 226 ntBASIC3.98□□□□□ -1.77
RETP07949 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.98□□□□□ -1.77
RETP07949 AC020914.4-201ENST00000597690 277 ntBASIC3.98□□□□□ -1.77
RETP07949 AL031985.2-201ENST00000600955 480 ntBASIC3.98□□□□□ -1.77
RETP07949 PSMA6P4-201ENST00000603247 718 ntBASIC3.98□□□□□ -1.77
RETP07949 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.98□□□□□ -1.77
RETP07949 AC012531.5-201ENST00000611375 151 ntBASIC3.98□□□□□ -1.77
RETP07949 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.98□□□□□ -1.77
RETP07949 OR5AC4P-202ENST00000642086 985 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms