Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFAP04085 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFAP04085 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFAP04085 AC108059.3-201ENST00000456388 214 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 AC009963.3-201ENST00000458090 486 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFAP04085 AP002453.1-201ENST00000492327 668 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 RPL30P11-201ENST00000495304 339 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFAP04085 FTH1P21-201ENST00000512179 511 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFAP04085 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFAP04085 IGKV3D-25-201ENST00000519599 235 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFAP04085 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFAP04085 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFAP04085 AC018552.1-201ENST00000562099 811 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 AC026464.5-201ENST00000562497 722 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFAP04085 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFAP04085 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFAP04085 RN7SL802P-201ENST00000577858 299 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 RN7SL475P-201ENST00000583379 298 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 AP001029.3-201ENST00000588063 596 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 AC008521.2-201ENST00000591021 259 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.99□□□□□ -1.45
PDGFAP04085 MIR6864-201ENST00000617935 70 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFAP04085 MIR6811-201ENST00000620409 58 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 AP001264.1-201ENST00000620602 703 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFAP04085 AC244100.1-202ENST00000621554 382 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 LINC02495-203ENST00000636704 242 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFAP04085 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PDGFAP04085 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
PDGFAP04085 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PDGFAP04085 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFAP04085 AL136531.3-201ENST00000624378 3658 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFAP04085 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.98□□□□□ -1.45
PDGFAP04085 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFAP04085 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PDGFAP04085 AC015799.1-201ENST00000622996 3122 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFAP04085 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFAP04085 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFAP04085 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.98□□□□□ -1.45
PDGFAP04085 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFAP04085 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 Y_RNA.128-201ENST00000363391 112 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 RN7SKP186-201ENST00000365371 303 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 RN7SKP69-201ENST00000365390 305 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFAP04085 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFAP04085 RNU6-738P-201ENST00000384531 106 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 MIR514A2-201ENST00000385131 88 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 MIR514A3-201ENST00000385132 88 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 MIR454-201ENST00000390180 115 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PDGFAP04085 AL139805.1-201ENST00000407837 289 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 AC004987.3-201ENST00000413879 771 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 AL359092.1-201ENST00000417156 265 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 AL358176.3-201ENST00000420757 454 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 HSPE1P1-201ENST00000421494 318 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFAP04085 RPL34P6-201ENST00000432390 345 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.98□□□□□ -1.45
PDGFAP04085 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFAP04085 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFAP04085 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.98□□□□□ -1.45
PDGFAP04085 AC073109.1-201ENST00000445066 978 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 AC104308.1-201ENST00000454621 333 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 snoU13.7-201ENST00000459220 104 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 KLHL2P1-201ENST00000508691 521 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 AC036111.2-201ENST00000533247 901 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.98□□□□□ -1.45
PDGFAP04085 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFAP04085 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFAP04085 MIR3671-201ENST00000580455 88 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 MIR4701-201ENST00000583094 63 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFAP04085 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFAP04085 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.98□□□□□ -1.45
PDGFAP04085 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.98□□□□□ -1.45
PDGFAP04085 AC091193.1-201ENST00000604640 448 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 AC123768.4-201ENST00000616244 701 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDGFAP04085 MIR6886-201ENST00000619864 61 ntBASIC5.98□□□□□ -1.45
PDGFAP04085 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
PDGFAP04085 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.98□□□□□ -1.45
PDGFAP04085 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms