Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.19□□□□□ -1.9
SPTA1P02549 AC245054.1-201ENST00000420944 258 ntBASIC3.19□□□□□ -1.9
SPTA1P02549 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.19□□□□□ -1.9
SPTA1P02549 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.19□□□□□ -1.9
SPTA1P02549 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.19□□□□□ -1.9
SPTA1P02549 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.19□□□□□ -1.9
SPTA1P02549 AL513124.1-201ENST00000450410 614 ntBASIC3.19□□□□□ -1.9
SPTA1P02549 AC098824.1-201ENST00000453565 980 ntBASIC3.19□□□□□ -1.9
SPTA1P02549 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.19□□□□□ -1.9
SPTA1P02549 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.19□□□□□ -1.9
SPTA1P02549 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.19□□□□□ -1.9
SPTA1P02549 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SPTA1P02549 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
SPTA1P02549 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SPTA1P02549 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
SPTA1P02549 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
SPTA1P02549 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.18□□□□□ -1.9
SPTA1P02549 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SPTA1P02549 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SPTA1P02549 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.18□□□□□ -1.9
SPTA1P02549 SNORA7.4-201ENST00000384249 137 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 SETP9-201ENST00000423837 832 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.18□□□□□ -1.9
SPTA1P02549 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.18□□□□□ -1.9
SPTA1P02549 EEF1B2P7-201ENST00000451177 676 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.18□□□□□ -1.9
SPTA1P02549 PPBPP1-201ENST00000510807 373 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.18□□□□□ -1.9
SPTA1P02549 AL121603.1-201ENST00000553815 142 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.18□□□□□ -1.9
SPTA1P02549 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.18□□□□□ -1.9
SPTA1P02549 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 BNIP3P41-202ENST00000616656 861 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 AL591424.2-201ENST00000617023 128 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SPTA1P02549 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SPTA1P02549 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SPTA1P02549 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SPTA1P02549 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
SPTA1P02549 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.18□□□□□ -1.9
SPTA1P02549 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SPTA1P02549 RNU1-15P-201ENST00000353977 144 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SPTA1P02549 AL691447.1-201ENST00000419456 387 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.18□□□□□ -1.9
SPTA1P02549 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.18□□□□□ -1.9
SPTA1P02549 HMGN2P27-201ENST00000427352 270 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.18□□□□□ -1.9
SPTA1P02549 snoU13.26-201ENST00000459452 105 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 AC026801.2-201ENST00000515352 425 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.18□□□□□ -1.9
SPTA1P02549 AC067852.4-201ENST00000590314 478 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 AC010591.1-201ENST00000603941 649 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 AC073657.2-201ENST00000605661 303 ntBASIC3.18□□□□□ -1.9
SPTA1P02549 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
SPTA1P02549 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SPTA1P02549 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SPTA1P02549 FAM133CP-201ENST00000332869 704 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SPTA1P02549 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.17□□□□□ -1.9
SPTA1P02549 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.17□□□□□ -1.9
SPTA1P02549 AC099563.1-201ENST00000456086 418 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 RN7SL863P-201ENST00000462370 296 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 RPL7P38-201ENST00000488396 739 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SPTA1P02549 AC023389.2-201ENST00000580031 955 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 AC022106.2-201ENST00000620114 757 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SPTA1P02549 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SPTA1P02549 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SPTA1P02549 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.17□□□□□ -1.9
SPTA1P02549 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SPTA1P02549 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SPTA1P02549 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SPTA1P02549 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
SPTA1P02549 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SPTA1P02549 OSTCP5-201ENST00000425293 453 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 AL035458.1-201ENST00000433096 585 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.17□□□□□ -1.9
SPTA1P02549 PTGES3P3-201ENST00000511479 482 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 RN7SKP46-201ENST00000515942 234 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.17□□□□□ -1.9
SPTA1P02549 AC138832.1-201ENST00000522871 556 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.17□□□□□ -1.9
SPTA1P02549 AC090877.1-201ENST00000561418 344 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 AC090312.2-201ENST00000582687 378 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 AC095038.2-201ENST00000621464 1070 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 AL732618.1-201ENST00000623251 301 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 AC015871.5-202ENST00000623252 701 ntBASIC3.17□□□□□ -1.9
SPTA1P02549 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.16□□□□□ -1.9
SPTA1P02549 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.16□□□□□ -1.9
SPTA1P02549 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.16□□□□□ -1.9
SPTA1P02549 NCOA4P2-201ENST00000340589 1813 ntBASIC3.16□□□□□ -1.9
SPTA1P02549 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SPTA1P02549 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPTA1P02549 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPTA1P02549 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SPTA1P02549 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPTA1P02549 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPTA1P02549 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms