Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFBP01127 RPS24P12-201ENST00000402084 394 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.22□□□□□ -1.73
PDGFBP01127 RPL31P45-201ENST00000419532 356 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 OR2AH1P-201ENST00000425717 928 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFBP01127 AP000907.1-201ENST00000428428 510 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.22□□□□□ -1.73
PDGFBP01127 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.22□□□□□ -1.73
PDGFBP01127 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.22□□□□□ -1.73
PDGFBP01127 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 NANOGP10-201ENST00000453325 895 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.22□□□□□ -1.73
PDGFBP01127 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFBP01127 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.22□□□□□ -1.73
PDGFBP01127 SNORA76.2-201ENST00000517095 137 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFBP01127 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.22□□□□□ -1.73
PDGFBP01127 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.22□□□□□ -1.73
PDGFBP01127 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.22□□□□□ -1.73
PDGFBP01127 MIR3922-201ENST00000585192 84 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 AC098483.2-201ENST00000603158 454 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 AL353600.1-201ENST00000608148 251 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 AL109620.1-201ENST00000618738 1197 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.22□□□□□ -1.73
PDGFBP01127 AC015871.5-202ENST00000623252 701 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.22□□□□□ -1.73
PDGFBP01127 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.22□□□□□ -1.73
PDGFBP01127 U6.107-201ENST00000637108 79 ntBASIC4.22□□□□□ -1.73
PDGFBP01127 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFBP01127 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFBP01127 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
PDGFBP01127 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.22□□□□□ -1.73
PDGFBP01127 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFBP01127 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.22□□□□□ -1.73
PDGFBP01127 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFBP01127 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PDGFBP01127 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
PDGFBP01127 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PDGFBP01127 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PDGFBP01127 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.73
PDGFBP01127 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.21□□□□□ -1.73
PDGFBP01127 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
PDGFBP01127 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
PDGFBP01127 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFBP01127 SEC63P2-201ENST00000503863 1939 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFBP01127 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFBP01127 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFBP01127 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PDGFBP01127 SNORA51.12-201ENST00000384448 134 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFBP01127 RPS12P23-201ENST00000419579 400 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.21□□□□□ -1.74
PDGFBP01127 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.21□□□□□ -1.74
PDGFBP01127 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.21□□□□□ -1.74
PDGFBP01127 AC093422.3-201ENST00000428506 305 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 AC005189.1-201ENST00000431286 310 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.21□□□□□ -1.74
PDGFBP01127 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 AL031584.1-201ENST00000447169 754 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 AL451050.1-201ENST00000450126 415 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 RPL6P9-201ENST00000466502 859 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 AC104689.1-201ENST00000473356 768 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 RPS29P19-201ENST00000479709 171 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 RPL21P103-201ENST00000479921 488 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 RPL23AP73-201ENST00000492507 471 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.21□□□□□ -1.74
PDGFBP01127 RN7SL323P-201ENST00000494712 295 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 HMGB3P16-201ENST00000508037 287 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 AC138938.1-201ENST00000515431 782 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 RNA5SP249-201ENST00000516127 99 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 RNU1-103P-201ENST00000516502 125 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.21□□□□□ -1.74
PDGFBP01127 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.21□□□□□ -1.74
PDGFBP01127 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.21□□□□□ -1.74
PDGFBP01127 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.21□□□□□ -1.74
PDGFBP01127 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.21□□□□□ -1.74
PDGFBP01127 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.21□□□□□ -1.74
PDGFBP01127 AP000919.1-202ENST00000581139 1264 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
PDGFBP01127 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFBP01127 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.21□□□□□ -1.74
PDGFBP01127 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFBP01127 AC083899.3-201ENST00000603413 594 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 AC005034.4-201ENST00000603612 899 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 AC079880.2-201ENST00000603790 1213 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.21□□□□□ -1.74
PDGFBP01127 AC024595.1-201ENST00000623088 387 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.21□□□□□ -1.74
PDGFBP01127 MTND5P1-201ENST00000445440 1375 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFBP01127 NSRP1P1-201ENST00000444067 1693 ntBASIC4.21□□□□□ -1.74
PDGFBP01127 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.21□□□□□ -1.74
PDGFBP01127 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFBP01127 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFBP01127 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.21□□□□□ -1.74
PDGFBP01127 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PDGFBP01127 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
PDGFBP01127 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms