Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL118508.4-201ENST00000624142 1176 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 MIR492-201ENST00000638676 116 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN9O95484 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN9O95484 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN9O95484 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLDN9O95484 AL049737.1-201ENST00000413920 1403 ntBASIC3.78□□□□□ -1.8
CLDN9O95484 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CLDN9O95484 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CLDN9O95484 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN9O95484 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN9O95484 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN9O95484 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.77□□□□□ -1.81
CLDN9O95484 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN9O95484 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN9O95484 RN7SKP44-201ENST00000363602 316 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 AL022722.2-201ENST00000402519 180 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 HNRNPDP2-201ENST00000406475 478 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 RNU2-6P-201ENST00000411404 190 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN9O95484 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN9O95484 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN9O95484 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN9O95484 YY1P1-201ENST00000427625 668 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 AC023347.2-201ENST00000433994 462 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN9O95484 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN9O95484 AL513321.1-201ENST00000441175 761 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN9O95484 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN9O95484 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN9O95484 NUTF2P7-201ENST00000453086 375 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN9O95484 TRBV8-2-201ENST00000475637 270 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 S100A11P1-201ENST00000477525 312 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 RPS3AP6-201ENST00000484430 795 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 AC110792.1-201ENST00000491826 472 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 HMGB1P21-201ENST00000502313 581 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN9O95484 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN9O95484 RN7SKP82-201ENST00000516786 223 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 CIR1P1-201ENST00000524055 1133 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN9O95484 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN9O95484 PTP4A1P6-201ENST00000531034 478 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.77□□□□□ -1.81
CLDN9O95484 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN9O95484 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN9O95484 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN9O95484 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 AC010680.4-201ENST00000605334 543 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 AC092653.1-201ENST00000608509 531 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 AC068831.8-201ENST00000620171 435 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 AC112484.5-201ENST00000624189 228 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 AC068724.3-201ENST00000625906 87 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CLDN9O95484 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN9O95484 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CLDN9O95484 RLIMP1-201ENST00000339626 1680 ntBASIC3.77□□□□□ -1.81
CLDN9O95484 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN9O95484 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN9O95484 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.77□□□□□ -1.81
CLDN9O95484 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN9O95484 AC017007.4-201ENST00000503353 1352 ntBASIC3.76□□□□□ -1.81
CLDN9O95484 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CLDN9O95484 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
CLDN9O95484 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.76□□□□□ -1.81
CLDN9O95484 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN9O95484 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN9O95484 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
CLDN9O95484 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN9O95484 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN9O95484 RNU1-89P-201ENST00000384592 164 ntBASIC3.76□□□□□ -1.81
CLDN9O95484 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CLDN9O95484 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN9O95484 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.76□□□□□ -1.81
CLDN9O95484 AL356095.1-201ENST00000417217 199 ntBASIC3.76□□□□□ -1.81
CLDN9O95484 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN9O95484 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN9O95484 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN9O95484 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN9O95484 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CLDN9O95484 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN9O95484 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN9O95484 AC004069.2-201ENST00000505438 1114 ntBASIC3.76□□□□□ -1.81
CLDN9O95484 BTF3L4P4-201ENST00000506381 449 ntBASIC3.76□□□□□ -1.81
CLDN9O95484 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN9O95484 MTCO1P35-201ENST00000515270 228 ntBASIC3.76□□□□□ -1.81
CLDN9O95484 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN9O95484 HMGB1P23-201ENST00000518743 568 ntBASIC3.76□□□□□ -1.81
CLDN9O95484 COX6B1P6-201ENST00000522347 255 ntBASIC3.76□□□□□ -1.81
CLDN9O95484 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN9O95484 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN9O95484 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.76□□□□□ -1.81
CLDN9O95484 AC107016.1-201ENST00000550463 337 ntBASIC3.76□□□□□ -1.81
CLDN9O95484 AC090877.1-201ENST00000561418 344 ntBASIC3.76□□□□□ -1.81
CLDN9O95484 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN9O95484 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN9O95484 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN9O95484 AC020910.2-201ENST00000603635 610 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms