Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC1.52□□□□□ -2.17
USH2AO75445 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 AC104446.1-201ENST00000613728 1321 ntBASIC1.52□□□□□ -2.17
USH2AO75445 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
USH2AO75445 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC1.52□□□□□ -2.17
USH2AO75445 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC1.52□□□□□ -2.17
USH2AO75445 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC1.52□□□□□ -2.17
USH2AO75445 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
USH2AO75445 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC1.52□□□□□ -2.17
USH2AO75445 EIF4A1P1-201ENST00000420241 934 ntBASIC1.52□□□□□ -2.17
USH2AO75445 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC1.52□□□□□ -2.17
USH2AO75445 AC105272.1-201ENST00000438604 198 ntBASIC1.52□□□□□ -2.17
USH2AO75445 AC021205.1-201ENST00000468797 348 ntBASIC1.52□□□□□ -2.17
USH2AO75445 RN7SL20P-201ENST00000488827 297 ntBASIC1.52□□□□□ -2.17
USH2AO75445 AC021678.1-201ENST00000505195 936 ntBASIC1.52□□□□□ -2.17
USH2AO75445 AC008549.1-201ENST00000512900 643 ntBASIC1.52□□□□□ -2.17
USH2AO75445 AC009812.2-201ENST00000517657 457 ntBASIC1.52□□□□□ -2.17
USH2AO75445 TBCA-206ENST00000518338 551 ntTSL 2 BASIC1.52□□□□□ -2.17
USH2AO75445 MTND6P33-201ENST00000571794 183 ntBASIC1.52□□□□□ -2.17
USH2AO75445 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC1.52□□□□□ -2.17
USH2AO75445 AL110115.1-201ENST00000614396 364 ntBASIC1.52□□□□□ -2.17
USH2AO75445 AC092184.1-201ENST00000625042 715 ntBASIC1.52□□□□□ -2.17
USH2AO75445 MAPK10-286ENST00000641208 8747 ntBASIC1.52□□□□□ -2.17
USH2AO75445 PRNCR1-201ENST00000635449 12727 ntBASIC1.52□□□□□ -2.17
USH2AO75445 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC1.52□□□□□ -2.17
USH2AO75445 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
USH2AO75445 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
USH2AO75445 AC092079.1-201ENST00000558620 1985 ntBASIC1.52□□□□□ -2.17
USH2AO75445 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 SNORA67.4-201ENST00000384688 142 ntBASIC1.52□□□□□ -2.17
USH2AO75445 SDCBPP2-201ENST00000424643 885 ntBASIC1.52□□□□□ -2.17
USH2AO75445 RPS29P26-201ENST00000477483 171 ntBASIC1.52□□□□□ -2.17
USH2AO75445 TRBV12-2-201ENST00000489763 344 ntBASIC1.52□□□□□ -2.17
USH2AO75445 AC005351.1-201ENST00000511152 786 ntBASIC1.52□□□□□ -2.17
USH2AO75445 AC026333.2-201ENST00000542164 106 ntBASIC1.52□□□□□ -2.17
USH2AO75445 AC008011.1-201ENST00000545989 227 ntBASIC1.52□□□□□ -2.17
USH2AO75445 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.52□□□□□ -2.17
USH2AO75445 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC1.52□□□□□ -2.17
USH2AO75445 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC1.52□□□□□ -2.17
USH2AO75445 ATP1B3P1-201ENST00000605365 821 ntBASIC1.52□□□□□ -2.17
USH2AO75445 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC1.52□□□□□ -2.17
USH2AO75445 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
USH2AO75445 SAGE2P-201ENST00000420011 2126 ntBASIC1.52□□□□□ -2.17
USH2AO75445 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC1.52□□□□□ -2.17
USH2AO75445 OR51A3P-201ENST00000413596 924 ntBASIC1.52□□□□□ -2.17
USH2AO75445 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC1.52□□□□□ -2.17
USH2AO75445 RPL5P2-201ENST00000429598 854 ntBASIC1.52□□□□□ -2.17
USH2AO75445 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.52□□□□□ -2.17
USH2AO75445 AC006480.1-201ENST00000449887 378 ntBASIC1.52□□□□□ -2.17
USH2AO75445 MTCYBP14-201ENST00000457471 715 ntBASIC1.52□□□□□ -2.17
USH2AO75445 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.52□□□□□ -2.17
USH2AO75445 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 AP002812.4-201ENST00000532139 286 ntBASIC1.52□□□□□ -2.17
USH2AO75445 AC004024.1-201ENST00000549244 247 ntBASIC1.52□□□□□ -2.17
USH2AO75445 HMGB1P6-201ENST00000569046 646 ntBASIC1.52□□□□□ -2.17
USH2AO75445 AC006363.1-201ENST00000603806 463 ntBASIC1.52□□□□□ -2.17
USH2AO75445 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
USH2AO75445 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
USH2AO75445 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 AL357075.1-201ENST00000404107 726 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AL591806.2-201ENST00000433122 173 ntBASIC1.51□□□□□ -2.17
USH2AO75445 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.51□□□□□ -2.17
USH2AO75445 RPS29P31-201ENST00000446147 164 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AP000936.2-201ENST00000447151 681 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC1.51□□□□□ -2.17
USH2AO75445 AC006517.1-201ENST00000480485 328 ntBASIC1.51□□□□□ -2.17
USH2AO75445 MIR449C-201ENST00000516047 92 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AC109329.2-201ENST00000519658 482 ntBASIC1.51□□□□□ -2.17
USH2AO75445 CYCSP28-201ENST00000534284 321 ntBASIC1.51□□□□□ -2.17
USH2AO75445 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC1.51□□□□□ -2.17
USH2AO75445 CKS1BP1-201ENST00000555221 240 ntBASIC1.51□□□□□ -2.17
USH2AO75445 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC1.51□□□□□ -2.17
USH2AO75445 AP003355.3-201ENST00000623465 114 ntBASIC1.51□□□□□ -2.17
USH2AO75445 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
USH2AO75445 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
USH2AO75445 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 AL672167.1-206ENST00000356293 943 ntBASIC1.51□□□□□ -2.17
USH2AO75445 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
USH2AO75445 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms