Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC023347.2-201ENST00000433994 462 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 PTMAP6-201ENST00000439110 327 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.06□□□□□ -1.6
FOXN3O00409 AC104651.2-201ENST00000447549 528 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN3O00409 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN3O00409 AC079168.2-201ENST00000453977 416 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN3O00409 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXN3O00409 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN3O00409 RN7SL346P-201ENST00000491561 294 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN3O00409 RNY4P37-201ENST00000516225 96 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 RNU1-6P-201ENST00000516290 144 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 RNU6-1261P-201ENST00000517194 104 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN3O00409 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN3O00409 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXN3O00409 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXN3O00409 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXN3O00409 AC074051.3-201ENST00000570238 358 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AP005119.2-201ENST00000579735 1105 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 SNORD39.3-201ENST00000584451 71 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXN3O00409 AC119501.1-201ENST00000603646 475 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AC018638.7-201ENST00000605836 1114 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AC006270.3-201ENST00000605967 1036 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AL360219.1-201ENST00000610230 366 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AL450489.1-201ENST00000612071 468 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 AC090510.2-201ENST00000617465 629 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AC098679.5-201ENST00000624394 571 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 AC026634.1-201ENST00000634369 198 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
FOXN3O00409 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 AL442639.1-201ENST00000625030 1899 ntBASIC5.06□□□□□ -1.6
FOXN3O00409 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXN3O00409 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
FOXN3O00409 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXN3O00409 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN3O00409 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
FOXN3O00409 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN3O00409 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN3O00409 ZNF542P-204ENST00000482727 1305 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 OR5H2-201ENST00000355273 945 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
FOXN3O00409 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN3O00409 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
FOXN3O00409 RNU6-657P-201ENST00000383904 107 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 RSL24D1P4-201ENST00000400938 484 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 AL590084.2-201ENST00000401481 382 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN3O00409 RNU2-28P-201ENST00000410457 189 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 RSU1P3-201ENST00000412878 835 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 AC004022.2-201ENST00000413824 193 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN3O00409 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.05□□□□□ -1.6
FOXN3O00409 LUZP4P1-201ENST00000415420 344 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 COX6B1P1-201ENST00000415962 213 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 P2RY10P2-201ENST00000416730 913 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN3O00409 USP9YP26-201ENST00000421008 661 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 FABP7P1-201ENST00000424004 391 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 AC234779.1-201ENST00000425910 285 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN3O00409 RPS27P18-201ENST00000431701 247 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 RPS25P9-201ENST00000435591 252 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.05□□□□□ -1.6
FOXN3O00409 LINC00888-204ENST00000487386 421 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN3O00409 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.05□□□□□ -1.6
FOXN3O00409 AC008638.1-201ENST00000506035 866 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 AC093281.2-201ENST00000510153 597 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXN3O00409 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN3O00409 SNORD116-26-201ENST00000516006 96 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN3O00409 AP001880.2-201ENST00000538233 448 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN3O00409 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN3O00409 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXN3O00409 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.05□□□□□ -1.6
FOXN3O00409 AC009117.1-201ENST00000563948 554 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 BGLT3-201ENST00000564523 994 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.05□□□□□ -1.6
FOXN3O00409 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXN3O00409 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXN3O00409 AC103881.1-201ENST00000603476 538 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 AC080013.6-201ENST00000606185 215 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 MIR7155-201ENST00000615925 56 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 AC092184.1-201ENST00000625042 715 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
FOXN3O00409 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN3O00409 CDR1-202ENST00000625883 1485 ntBASIC5.05□□□□□ -1.6
FOXN3O00409 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXN3O00409 AC022893.2-201ENST00000564832 3296 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms