Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM1O00151 UBE2D3P3-201ENST00000426992 425 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM1O00151 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM1O00151 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM1O00151 ARL5AP2-201ENST00000444698 533 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM1O00151 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM1O00151 AC053481.1-201ENST00000467217 306 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM1O00151 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM1O00151 AL035404.1-201ENST00000497982 568 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.95□□□□□ -1.78
PDLIM1O00151 AC010285.3-201ENST00000511668 676 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 PHBP14-201ENST00000512887 367 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM1O00151 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM1O00151 IGKV2-36-201ENST00000519999 223 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 C1GALT1P3-201ENST00000522049 819 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.95□□□□□ -1.78
PDLIM1O00151 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM1O00151 AC006064.5-201ENST00000541782 248 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.95□□□□□ -1.78
PDLIM1O00151 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PDLIM1O00151 AL109766.1-201ENST00000555080 552 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AL161713.1-201ENST00000555538 145 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AC104229.1-201ENST00000561364 255 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AC012254.4-201ENST00000588843 273 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM1O00151 AP001160.4-201ENST00000596971 382 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AL365503.1-201ENST00000605247 905 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AL356218.2-201ENST00000605264 187 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AC245100.7-201ENST00000609678 442 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 AC092574.1-201ENST00000609771 420 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM1O00151 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 AC008432.1-201ENST00000615912 1320 ntBASIC3.95□□□□□ -1.78
PDLIM1O00151 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM1O00151 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM1O00151 AC092326.2-201ENST00000624772 1561 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM1O00151 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM1O00151 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM1O00151 AC139713.2-214ENST00000642059 1811 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 RNA5SP447-201ENST00000363749 119 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 RNU1-130P-201ENST00000363930 160 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 MIR184-201ENST00000384962 84 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 AC008173.1-201ENST00000418901 264 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 MTCO2P1-201ENST00000424648 477 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 AL732292.1-201ENST00000426692 226 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 MTCO1P43-201ENST00000431831 488 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM1O00151 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM1O00151 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM1O00151 MTND2P28-201ENST00000457540 1044 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 TMED11P-201ENST00000479478 690 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 RPL23AP44-201ENST00000482216 473 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM1O00151 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PDLIM1O00151 RNU6-334P-201ENST00000517072 102 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 IGKV2-38-201ENST00000517443 247 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 AC034205.1-201ENST00000520621 638 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.94□□□□□ -1.78
PDLIM1O00151 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM1O00151 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM1O00151 AC115085.1-201ENST00000588924 229 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 ABI1P1-201ENST00000603375 1120 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 AC115621.1-201ENST00000604653 858 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 BNIP3P19-201ENST00000605397 577 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 AC026741.1-201ENST00000605892 482 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 AL021997.2-201ENST00000615674 271 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 MIR7702-201ENST00000621931 59 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 AC004943.3-201ENST00000624116 600 ntBASIC3.94□□□□□ -1.78
PDLIM1O00151 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.94□□□□□ -1.78
PDLIM1O00151 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.94□□□□□ -1.78
PDLIM1O00151 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PDLIM1O00151 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM1O00151 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM1O00151 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PDLIM1O00151 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PDLIM1O00151 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.93□□□□□ -1.78
PDLIM1O00151 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM1O00151 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDLIM1O00151 RNA5SP27-201ENST00000363839 119 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 MIR3065-201ENST00000390137 79 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PDLIM1O00151 U3.22-201ENST00000391120 215 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.93□□□□□ -1.78
PDLIM1O00151 AC007390.1-201ENST00000415722 356 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 TMSB10P2-201ENST00000416049 131 ntBASIC3.93□□□□□ -1.78
PDLIM1O00151 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.93□□□□□ -1.78
PDLIM1O00151 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.93□□□□□ -1.78
PDLIM1O00151 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.93□□□□□ -1.78
PDLIM1O00151 RPL18P10-201ENST00000425606 538 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms